Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
ZNF546Q86UE3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 MIR6765-201ENST00000614092 87 ntBASIC17.69■□□□□ 0.42
ZNF546Q86UE3 AC011551.1-201ENST00000614101 683 ntBASIC17.69■□□□□ 0.42
ZNF546Q86UE3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF546Q86UE3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.68■□□□□ 0.42
ZNF546Q86UE3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF546Q86UE3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.67■□□□□ 0.42
ZNF546Q86UE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF546Q86UE3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 AL592293.1-201ENST00000502889 1188 ntBASIC17.66■□□□□ 0.42
ZNF546Q86UE3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF546Q86UE3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 MIR4449-201ENST00000578365 66 ntBASIC17.65■□□□□ 0.42
ZNF546Q86UE3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 OXCT2P1-201ENST00000447263 1535 ntBASIC17.65■□□□□ 0.42
ZNF546Q86UE3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF546Q86UE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms