Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 AL499627.2-201ENST00000606283 725 ntBASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCHD4Q6ZW05 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCHD4Q6ZW05 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 LINC01521-201ENST00000504184 1943 ntBASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCHD4Q6ZW05 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCHD4Q6ZW05 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 GUSBP5-201ENST00000418136 578 ntBASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCHD4Q6ZW05 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.52■□□□□ 0.71
PTCHD4Q6ZW05 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTCHD4Q6ZW05 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 AC006455.2-201ENST00000429931 906 ntBASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
PTCHD4Q6ZW05 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCHD4Q6ZW05 AC241377.3-202ENST00000626088 1088 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms