Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.21■■■□□ 2.11
BRWD3Q6RI45 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.21■■■□□ 2.11
BRWD3Q6RI45 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRWD3Q6RI45 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC28.21■■■□□ 2.11
BRWD3Q6RI45 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
BRWD3Q6RI45 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
BRWD3Q6RI45 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
BRWD3Q6RI45 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
BRWD3Q6RI45 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.2■■■□□ 2.11
BRWD3Q6RI45 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
BRWD3Q6RI45 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.2■■■□□ 2.1
BRWD3Q6RI45 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRWD3Q6RI45 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRWD3Q6RI45 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.19■■■□□ 2.1
BRWD3Q6RI45 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRWD3Q6RI45 RN7SL850P-201ENST00000579959 291 ntBASIC28.19■■■□□ 2.1
BRWD3Q6RI45 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.19■■■□□ 2.1
BRWD3Q6RI45 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 KRT18P35-201ENST00000510488 1269 ntBASIC28.18■■■□□ 2.1
BRWD3Q6RI45 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRWD3Q6RI45 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRWD3Q6RI45 KRT17P1-201ENST00000399211 1546 ntBASIC28.17■■■□□ 2.1
BRWD3Q6RI45 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC28.17■■■□□ 2.1
BRWD3Q6RI45 SPIB-206ENST00000596074 847 ntTSL 2 BASIC28.17■■■□□ 2.1
BRWD3Q6RI45 AC012306.2-201ENST00000609350 630 ntBASIC28.17■■■□□ 2.1
BRWD3Q6RI45 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.17■■■□□ 2.1
BRWD3Q6RI45 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 AC087499.1-201ENST00000418141 1075 ntBASIC28.16■■■□□ 2.1
BRWD3Q6RI45 TSPY7P-201ENST00000431358 1114 ntBASIC28.16■■■□□ 2.1
BRWD3Q6RI45 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRWD3Q6RI45 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 AL355075.4-201ENST00000554988 638 ntBASIC28.15■■■□□ 2.1
BRWD3Q6RI45 TK2-213ENST00000563369 882 ntTSL 5 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 WDR88-203ENST00000592765 651 ntTSL 5 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 PNMA6B-201ENST00000538162 1200 ntBASIC28.15■■■□□ 2.1
BRWD3Q6RI45 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC28.15■■■□□ 2.1
BRWD3Q6RI45 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.1
BRWD3Q6RI45 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
BRWD3Q6RI45 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BRWD3Q6RI45 AC133561.5-201ENST00000635547 218 ntBASIC28.14■■■□□ 2.1
BRWD3Q6RI45 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
BRWD3Q6RI45 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
BRWD3Q6RI45 RBM17P2-201ENST00000616397 1405 ntBASIC28.14■■■□□ 2.09
BRWD3Q6RI45 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 AL355472.2-201ENST00000422958 438 ntBASIC28.13■■■□□ 2.09
BRWD3Q6RI45 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.13■■■□□ 2.09
BRWD3Q6RI45 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 AP004607.7-201ENST00000527152 1677 ntBASIC28.12■■■□□ 2.09
BRWD3Q6RI45 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC28.12■■■□□ 2.09
BRWD3Q6RI45 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC28.11■■■□□ 2.09
BRWD3Q6RI45 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms