Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 AL136967.2-201ENST00000623968 743 ntBASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRFN4Q6PJG9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 MIR939-201ENST00000401314 82 ntBASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 SUDS3P1-201ENST00000505831 966 ntBASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 AC027682.1-201ENST00000562846 899 ntBASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRFN4Q6PJG9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 AF213884.3-201ENST00000563833 479 ntBASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
LRFN4Q6PJG9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRFN4Q6PJG9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 RASA4CP-201ENST00000424092 1398 ntBASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 IGHV3-19-201ENST00000521488 291 ntBASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRFN4Q6PJG9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRFN4Q6PJG9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.08■□□□□ 0.64
LRFN4Q6PJG9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms