Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASC4Q6P4E1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.71■■□□□ 1.07
CASC4Q6P4E1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASC4Q6P4E1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 Z98882.1-201ENST00000622160 2253 ntBASIC21.69■■□□□ 1.06
CASC4Q6P4E1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 AL136116.3-201ENST00000402907 1138 ntBASIC21.69■■□□□ 1.06
CASC4Q6P4E1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.69■■□□□ 1.06
CASC4Q6P4E1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CASC4Q6P4E1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 AC005229.4-201ENST00000610085 2198 ntBASIC21.68■■□□□ 1.06
CASC4Q6P4E1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASC4Q6P4E1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.67■■□□□ 1.06
CASC4Q6P4E1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 AC104564.3-201ENST00000582367 638 ntBASIC21.66■■□□□ 1.06
CASC4Q6P4E1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CASC4Q6P4E1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CASC4Q6P4E1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CASC4Q6P4E1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 AP005435.1-201ENST00000529293 1178 ntBASIC21.64■■□□□ 1.05
CASC4Q6P4E1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 AC131212.1-201ENST00000613771 668 ntBASIC21.64■■□□□ 1.05
CASC4Q6P4E1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CASC4Q6P4E1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms