Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TMEM53Q6P2H8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 AL499627.2-201ENST00000606283 725 ntBASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TMEM53Q6P2H8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM53Q6P2H8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 AL138724.1-201ENST00000606771 1088 ntBASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM53Q6P2H8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 MIR3181-201ENST00000578512 73 ntBASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM53Q6P2H8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM53Q6P2H8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM53Q6P2H8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM53Q6P2H8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM53Q6P2H8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms