Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 AL049597.2-201ENST00000565575 961 ntBASIC21.04■□□□□ 0.96
RIF1Q5UIP0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 MIR4785-201ENST00000585005 73 ntBASIC21.04■□□□□ 0.96
RIF1Q5UIP0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIF1Q5UIP0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 AL355075.4-201ENST00000554988 638 ntBASIC21.03■□□□□ 0.96
RIF1Q5UIP0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 TSPY15P-201ENST00000457163 923 ntBASIC21.03■□□□□ 0.96
RIF1Q5UIP0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.03■□□□□ 0.96
RIF1Q5UIP0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 AC092865.7-201ENST00000641832 219 ntBASIC21.02■□□□□ 0.96
RIF1Q5UIP0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 RN7SL471P-201ENST00000580476 299 ntBASIC21.02■□□□□ 0.96
RIF1Q5UIP0 AL135905.2-201ENST00000584934 1404 ntBASIC21.02■□□□□ 0.96
RIF1Q5UIP0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RIF1Q5UIP0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 TSPY7P-201ENST00000431358 1114 ntBASIC21.01■□□□□ 0.95
RIF1Q5UIP0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 AL353708.3-201ENST00000610272 989 ntBASIC21.01■□□□□ 0.95
RIF1Q5UIP0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIF1Q5UIP0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RIF1Q5UIP0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21■□□□□ 0.95
RIF1Q5UIP0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21■□□□□ 0.95
RIF1Q5UIP0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21■□□□□ 0.95
RIF1Q5UIP0 AP001412.1-201ENST00000608405 714 ntBASIC21■□□□□ 0.95
RIF1Q5UIP0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21■□□□□ 0.95
RIF1Q5UIP0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21■□□□□ 0.95
RIF1Q5UIP0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 KRT17P3-201ENST00000420566 1262 ntBASIC21■□□□□ 0.95
RIF1Q5UIP0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21■□□□□ 0.95
RIF1Q5UIP0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21■□□□□ 0.95
RIF1Q5UIP0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21■□□□□ 0.95
RIF1Q5UIP0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21■□□□□ 0.95
RIF1Q5UIP0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIF1Q5UIP0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21■□□□□ 0.95
RIF1Q5UIP0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
RIF1Q5UIP0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 RPS2P55-201ENST00000397318 883 ntBASIC20.98■□□□□ 0.95
RIF1Q5UIP0 AC107956.1-201ENST00000494359 873 ntBASIC20.98■□□□□ 0.95
RIF1Q5UIP0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 AL590326.2-201ENST00000625139 305 ntBASIC20.98■□□□□ 0.95
RIF1Q5UIP0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RIF1Q5UIP0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIF1Q5UIP0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RIF1Q5UIP0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIF1Q5UIP0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RIF1Q5UIP0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms