Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 IGHV3-19-201ENST00000521488 291 ntBASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 AL136967.2-201ENST00000623968 743 ntBASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEPDC1Q5TB30 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 RASA4CP-201ENST00000424092 1398 ntBASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 SUDS3P1-201ENST00000505831 966 ntBASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 AF213884.3-201ENST00000563833 479 ntBASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
DEPDC1Q5TB30 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DEPDC1Q5TB30 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DEPDC1Q5TB30 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 AC091305.1-201ENST00000479476 895 ntBASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.57■□□□□ 0.88
DEPDC1Q5TB30 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DEPDC1Q5TB30 FAM99A-202ENST00000538190 1989 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 460.9 ms