Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 AL034346.1-201ENST00000568244 1277 ntBASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6AP1LQ52LC2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 SYT6-210ENST00000641643 1587 ntBASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 AL138724.1-201ENST00000606771 1088 ntBASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6AP1LQ52LC2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 DUX4L19-201ENST00000557448 1267 ntBASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP6AP1LQ52LC2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.54■□□□□ 0.88
ATP6AP1LQ52LC2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6AP1LQ52LC2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATP6AP1LQ52LC2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms