Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTPN20Q4JDL3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PTPN20Q4JDL3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTPN20Q4JDL3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PTPN20Q4JDL3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 AC244015.2-201ENST00000616358 1861 ntBASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PTPN20Q4JDL3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 AC027612.3-201ENST00000413684 1047 ntBASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PTPN20Q4JDL3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.47■■□□□ 1.19
PTPN20Q4JDL3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 AC007375.3-201ENST00000600936 2314 ntBASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PTPN20Q4JDL3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 AC104564.3-201ENST00000582367 638 ntBASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.45■■□□□ 1.18
PTPN20Q4JDL3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTPN20Q4JDL3 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.44■■□□□ 1.18
PTPN20Q4JDL3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTPN20Q4JDL3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms