Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSMST1Q4G0I0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.78■□□□□ 0.92
CCSMST1Q4G0I0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSMST1Q4G0I0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCSMST1Q4G0I0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CCSMST1Q4G0I0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCSMST1Q4G0I0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.76■□□□□ 0.91
CCSMST1Q4G0I0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSMST1Q4G0I0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 LINC02228-203ENST00000641970 1355 ntBASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 AC123595.1-201ENST00000440769 1046 ntBASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 CCDC92B-201ENST00000575506 885 ntBASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSMST1Q4G0I0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 AC026271.2-201ENST00000428091 497 ntBASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 TERF1P2-201ENST00000583350 1212 ntBASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 AC087623.3-201ENST00000607047 1098 ntBASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCSMST1Q4G0I0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCSMST1Q4G0I0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CCSMST1Q4G0I0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCSMST1Q4G0I0 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
CCSMST1Q4G0I0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms