Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 CNS1YBR155W 1158 nt2.07□□□□□ -2.08
VPS13Q07878 ERB1YMR049C 2424 nt2.07□□□□□ -2.08
VPS13Q07878 MSH4YFL003C 2637 nt2.06□□□□□ -2.08
VPS13Q07878 REB1YBR049C 2433 nt2.06□□□□□ -2.08
VPS13Q07878 MIP6YHR015W 1980 nt2.06□□□□□ -2.08
VPS13Q07878 RPL17BYJL177W 555 nt2.06□□□□□ -2.08
VPS13Q07878 PRM2YIL037C 1971 nt2.05□□□□□ -2.08
VPS13Q07878 NUM1YDR150W 8247 nt2.05□□□□□ -2.08
VPS13Q07878 ADK1YDR226W 669 nt2.05□□□□□ -2.08
VPS13Q07878 AIM22YJL046W 1230 nt2.05□□□□□ -2.08
VPS13Q07878 YJL052C-AYJL052C-A 120 nt2.05□□□□□ -2.08
VPS13Q07878 MRM1YOR201C 1239 nt2.05□□□□□ -2.08
VPS13Q07878 SPC72YAL047C 1869 nt2.05□□□□□ -2.08
VPS13Q07878 BUD6YLR319C 2367 nt2.05□□□□□ -2.08
VPS13Q07878 RAV1YJR033C 4074 nt2.05□□□□□ -2.08
VPS13Q07878 UTP15YMR093W 1542 nt2.05□□□□□ -2.08
VPS13Q07878 CAP2YIL034C 864 nt2.04□□□□□ -2.08
VPS13Q07878 IES3YLR052W 753 nt2.04□□□□□ -2.08
VPS13Q07878 TCB2YNL087W 3537 nt2.04□□□□□ -2.08
VPS13Q07878 RFC5YBR087W 1065 nt2.04□□□□□ -2.08
VPS13Q07878 NNK1YKL171W 2787 nt2.04□□□□□ -2.08
VPS13Q07878 CWC24YLR323C 780 nt2.04□□□□□ -2.08
VPS13Q07878 PPT2YPL148C 522 nt2.04□□□□□ -2.08
VPS13Q07878 TOM20YGR082W 552 nt2.03□□□□□ -2.08
VPS13Q07878 PCL7YIL050W 858 nt2.03□□□□□ -2.08
VPS13Q07878 ARO7YPR060C 771 nt2.03□□□□□ -2.08
VPS13Q07878 TEC1YBR083W 1461 nt2.03□□□□□ -2.08
VPS13Q07878 SRO77YBL106C 3033 nt2.03□□□□□ -2.09
VPS13Q07878 TCP1YDR212W 1680 nt2.02□□□□□ -2.09
VPS13Q07878 KAP123YER110C 3342 nt2.02□□□□□ -2.09
VPS13Q07878 GIS1YDR096W 2685 nt2.02□□□□□ -2.09
VPS13Q07878 SEY1YOR165W 2331 nt2.02□□□□□ -2.09
VPS13Q07878 AIM23YJL131C 1071 nt2.02□□□□□ -2.09
VPS13Q07878 RAS1YOR101W 930 nt2.02□□□□□ -2.09
VPS13Q07878 YPR053CYPR053C 456 nt2.02□□□□□ -2.09
VPS13Q07878 IBA57YJR122W 1494 nt2.02□□□□□ -2.09
VPS13Q07878 APL2YKL135C 2181 nt2.02□□□□□ -2.09
VPS13Q07878 YFL065CYFL065C 309 nt2.02□□□□□ -2.09
VPS13Q07878 YER079C-AYER079C-A 339 nt2.01□□□□□ -2.09
VPS13Q07878 MNR2YKL064W 2910 nt2.01□□□□□ -2.09
VPS13Q07878 YOR072W-AYOR072W-A 249 nt2.01□□□□□ -2.09
VPS13Q07878 RTS1YOR014W 2274 nt2.01□□□□□ -2.09
VPS13Q07878 TAH1YCR060W 336 nt2.01□□□□□ -2.09
VPS13Q07878 YGL101WYGL101W 648 nt2.01□□□□□ -2.09
VPS13Q07878 TRM7YBR061C 933 nt2.01□□□□□ -2.09
VPS13Q07878 MSS116YDR194C 1995 nt2.01□□□□□ -2.09
VPS13Q07878 GLO3YER122C 1482 nt2.01□□□□□ -2.09
VPS13Q07878 YJL181WYJL181W 1836 nt2.01□□□□□ -2.09
VPS13Q07878 VPS45YGL095C 1734 nt2.01□□□□□ -2.09
VPS13Q07878 TVP15YDR100W 432 nt2□□□□□ -2.09
VPS13Q07878 SEN1YLR430W 6696 nt2□□□□□ -2.09
VPS13Q07878 GIN4YDR507C 3429 nt2□□□□□ -2.09
VPS13Q07878 GUK1YDR454C 564 nt2□□□□□ -2.09
VPS13Q07878 SQS1YNL224C 2304 nt2□□□□□ -2.09
VPS13Q07878 FAS1YKL182W 6156 nt2□□□□□ -2.09
VPS13Q07878 SEC7YDR170C 6030 nt2□□□□□ -2.09
VPS13Q07878 YHL006W-AYHL006W-A 354 nt2□□□□□ -2.09
VPS13Q07878 TMC1YOR052C 453 nt2□□□□□ -2.09
VPS13Q07878 SUC2YIL162W 1599 nt1.99□□□□□ -2.09
VPS13Q07878 SLH1YGR271W 5904 nt1.99□□□□□ -2.09
VPS13Q07878 RIT1YMR283C 1542 nt1.99□□□□□ -2.09
VPS13Q07878 BRR6YGL247W 594 nt1.99□□□□□ -2.09
VPS13Q07878 ELO3YLR372W 1038 nt1.99□□□□□ -2.09
VPS13Q07878 MLH1YMR167W 2310 nt1.99□□□□□ -2.09
VPS13Q07878 SYT1YPR095C 3681 nt1.99□□□□□ -2.09
VPS13Q07878 YDR442WYDR442W 393 nt1.99□□□□□ -2.09
VPS13Q07878 MDM34YGL219C 1380 nt1.99□□□□□ -2.09
VPS13Q07878 MDV1YJL112W 2145 nt1.99□□□□□ -2.09
VPS13Q07878 GGA1YDR358W 1674 nt1.98□□□□□ -2.09
VPS13Q07878 CWC22YGR278W 1734 nt1.98□□□□□ -2.09
VPS13Q07878 FAF1YIL019W 1041 nt1.98□□□□□ -2.09
VPS13Q07878 COA6YMR244C-A 315 nt1.98□□□□□ -2.09
VPS13Q07878 TYE7YOR344C 876 nt1.98□□□□□ -2.09
VPS13Q07878 AIM19YIL087C 474 nt1.98□□□□□ -2.09
VPS13Q07878 BOS1YLR078C 735 nt1.98□□□□□ -2.09
VPS13Q07878 ADK2YER170W 678 nt1.97□□□□□ -2.09
VPS13Q07878 YIL025CYIL025C 375 nt1.97□□□□□ -2.09
VPS13Q07878 RSM19YNR037C 276 nt1.97□□□□□ -2.09
VPS13Q07878 THI22YPR121W 1719 nt1.97□□□□□ -2.09
VPS13Q07878 OKP1YGR179C 1221 nt1.97□□□□□ -2.09
VPS13Q07878 YPL142CYPL142C 318 nt1.97□□□□□ -2.09
VPS13Q07878 ALG14YBR070C 714 nt1.97□□□□□ -2.09
VPS13Q07878 NFT1YKR103W 3657 nt1.97□□□□□ -2.09
VPS13Q07878 YJL016WYJL016W 1686 nt1.97□□□□□ -2.09
VPS13Q07878 NMA111YNL123W 2994 nt1.97□□□□□ -2.09
VPS13Q07878 RRI1YDL216C 1323 nt1.97□□□□□ -2.09
VPS13Q07878 ADI1YMR009W 540 nt1.97□□□□□ -2.09
VPS13Q07878 LAP2YNL045W 2016 nt1.97□□□□□ -2.09
VPS13Q07878 SPO73YER046W 432 nt1.96□□□□□ -2.1
VPS13Q07878 DSL1YNL258C 2265 nt1.96□□□□□ -2.1
VPS13Q07878 DUG3YNL191W 1074 nt1.96□□□□□ -2.1
VPS13Q07878 CDH1YGL003C 1701 nt1.96□□□□□ -2.1
VPS13Q07878 CTK1YKL139W 1587 nt1.96□□□□□ -2.1
VPS13Q07878 RTN1YDR233C 888 nt1.95□□□□□ -2.1
VPS13Q07878 CDC31YOR257W 486 nt1.95□□□□□ -2.1
VPS13Q07878 YLR154W-EYLR154W-E 204 nt1.95□□□□□ -2.1
VPS13Q07878 SEC6YIL068C 2418 nt1.95□□□□□ -2.1
VPS13Q07878 KAP95YLR347C 2586 nt1.95□□□□□ -2.1
VPS13Q07878 SRO9YCL037C 1305 nt1.95□□□□□ -2.1
VPS13Q07878 DOT6YER088C 2013 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms