Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HSPG2P98160 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.45□□□□□ -0.26
HSPG2P98160 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.45□□□□□ -0.26
HSPG2P98160 AL355472.2-201ENST00000422958 438 ntBASIC13.45□□□□□ -0.26
HSPG2P98160 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.45□□□□□ -0.26
HSPG2P98160 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.45□□□□□ -0.26
HSPG2P98160 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.45□□□□□ -0.26
HSPG2P98160 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
HSPG2P98160 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HSPG2P98160 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.45□□□□□ -0.26
HSPG2P98160 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.45□□□□□ -0.26
HSPG2P98160 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.45□□□□□ -0.26
HSPG2P98160 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.45□□□□□ -0.26
HSPG2P98160 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.45□□□□□ -0.26
HSPG2P98160 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.45□□□□□ -0.26
HSPG2P98160 FAM197Y4-202ENST00000622692 608 ntBASIC13.45□□□□□ -0.26
HSPG2P98160 AC068587.7-201ENST00000641602 218 ntBASIC13.45□□□□□ -0.26
HSPG2P98160 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HSPG2P98160 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 KRT17P1-201ENST00000399211 1546 ntBASIC13.44□□□□□ -0.26
HSPG2P98160 AC010980.2-201ENST00000587099 1412 ntBASIC13.44□□□□□ -0.26
HSPG2P98160 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HSPG2P98160 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 AC012618.2-201ENST00000428058 849 ntBASIC13.44□□□□□ -0.26
HSPG2P98160 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.44□□□□□ -0.26
HSPG2P98160 AC233702.5-201ENST00000584107 538 ntBASIC13.44□□□□□ -0.26
HSPG2P98160 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 CD177P1-201ENST00000606252 935 ntBASIC13.44□□□□□ -0.26
HSPG2P98160 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.44□□□□□ -0.26
HSPG2P98160 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HSPG2P98160 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC13.44□□□□□ -0.26
HSPG2P98160 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 TMPOP1-202ENST00000424642 1267 ntBASIC13.43□□□□□ -0.26
HSPG2P98160 TSPY7P-201ENST00000431358 1114 ntBASIC13.43□□□□□ -0.26
HSPG2P98160 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 AL162412.1-201ENST00000567129 965 ntBASIC13.43□□□□□ -0.26
HSPG2P98160 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
HSPG2P98160 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.43□□□□□ -0.26
HSPG2P98160 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.43□□□□□ -0.26
HSPG2P98160 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.43□□□□□ -0.26
HSPG2P98160 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.43□□□□□ -0.26
HSPG2P98160 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HSPG2P98160 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.43□□□□□ -0.26
HSPG2P98160 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.43□□□□□ -0.26
HSPG2P98160 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.42□□□□□ -0.26
HSPG2P98160 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.42□□□□□ -0.26
HSPG2P98160 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HSPG2P98160 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.41□□□□□ -0.26
HSPG2P98160 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 RBM17P2-201ENST00000616397 1405 ntBASIC13.41□□□□□ -0.26
HSPG2P98160 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 POU5F1P4-201ENST00000413175 1085 ntBASIC13.41□□□□□ -0.26
HSPG2P98160 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.41□□□□□ -0.26
HSPG2P98160 AL353708.3-201ENST00000610272 989 ntBASIC13.41□□□□□ -0.26
HSPG2P98160 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HSPG2P98160 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms