Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
SIRPAP78324 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPAP78324 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.41■□□□□ 0.7
SIRPAP78324 AC027612.3-201ENST00000413684 1047 ntBASIC19.41■□□□□ 0.7
SIRPAP78324 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPAP78324 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
SIRPAP78324 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SIRPAP78324 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPAP78324 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.41■□□□□ 0.7
SIRPAP78324 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPAP78324 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIRPAP78324 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SIRPAP78324 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.4■□□□□ 0.7
SIRPAP78324 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 AC010141.3-201ENST00000456659 717 ntBASIC19.4■□□□□ 0.7
SIRPAP78324 AC104564.3-201ENST00000582367 638 ntBASIC19.4■□□□□ 0.7
SIRPAP78324 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.4■□□□□ 0.7
SIRPAP78324 AL024507.2-201ENST00000606070 2574 ntBASIC19.4■□□□□ 0.7
SIRPAP78324 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.4■□□□□ 0.7
SIRPAP78324 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.4■□□□□ 0.7
SIRPAP78324 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.4■□□□□ 0.7
SIRPAP78324 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SIRPAP78324 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIRPAP78324 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIRPAP78324 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIRPAP78324 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 AC034268.1-201ENST00000441047 882 ntBASIC19.39■□□□□ 0.69
SIRPAP78324 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.39■□□□□ 0.69
SIRPAP78324 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.39■□□□□ 0.69
SIRPAP78324 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.39■□□□□ 0.69
SIRPAP78324 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIRPAP78324 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
SIRPAP78324 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIRPAP78324 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIRPAP78324 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.38■□□□□ 0.69
SIRPAP78324 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
SIRPAP78324 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 AC026310.3-201ENST00000625186 2373 ntBASIC19.38■□□□□ 0.69
SIRPAP78324 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIRPAP78324 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.37■□□□□ 0.69
SIRPAP78324 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPAP78324 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPAP78324 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
SIRPAP78324 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.37■□□□□ 0.69
SIRPAP78324 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPAP78324 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.37■□□□□ 0.69
SIRPAP78324 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.37■□□□□ 0.69
SIRPAP78324 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SIRPAP78324 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.37■□□□□ 0.69
SIRPAP78324 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPAP78324 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIRPAP78324 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.36■□□□□ 0.69
SIRPAP78324 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.36■□□□□ 0.69
SIRPAP78324 AC123595.1-201ENST00000440769 1046 ntBASIC19.36■□□□□ 0.69
SIRPAP78324 LINC01960-201ENST00000563759 1884 ntBASIC19.36■□□□□ 0.69
SIRPAP78324 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.36■□□□□ 0.69
SIRPAP78324 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIRPAP78324 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.35■□□□□ 0.69
SIRPAP78324 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIRPAP78324 AC010542.4-201ENST00000563151 1910 ntBASIC19.35■□□□□ 0.69
SIRPAP78324 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.35■□□□□ 0.69
SIRPAP78324 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms