Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TPM4P67936 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TPM4P67936 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM4P67936 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM4P67936 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 AL031602.1-201ENST00000633169 911 ntBASIC23.83■■□□□ 1.41
TPM4P67936 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM4P67936 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.83■■□□□ 1.41
TPM4P67936 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM4P67936 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.82■■□□□ 1.4
TPM4P67936 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.82■■□□□ 1.4
TPM4P67936 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM4P67936 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.82■■□□□ 1.4
TPM4P67936 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.81■■□□□ 1.4
TPM4P67936 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.81■■□□□ 1.4
TPM4P67936 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TPM4P67936 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.81■■□□□ 1.4
TPM4P67936 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.81■■□□□ 1.4
TPM4P67936 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
TPM4P67936 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TPM4P67936 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 OXCT2P1-201ENST00000447263 1535 ntBASIC23.8■■□□□ 1.4
TPM4P67936 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.8■■□□□ 1.4
TPM4P67936 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.8■■□□□ 1.4
TPM4P67936 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.8■■□□□ 1.4
TPM4P67936 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.8■■□□□ 1.4
TPM4P67936 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.8■■□□□ 1.4
TPM4P67936 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 LINC01521-201ENST00000504184 1943 ntBASIC23.8■■□□□ 1.4
TPM4P67936 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.8■■□□□ 1.4
TPM4P67936 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM4P67936 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 AC010997.5-201ENST00000609182 354 ntBASIC23.79■■□□□ 1.4
TPM4P67936 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.79■■□□□ 1.4
TPM4P67936 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TPM4P67936 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.79■■□□□ 1.4
TPM4P67936 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM4P67936 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TPM4P67936 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TPM4P67936 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM4P67936 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.78■■□□□ 1.4
TPM4P67936 Z92544.1-202ENST00000571933 1220 ntBASIC23.78■■□□□ 1.4
TPM4P67936 AC241377.3-202ENST00000626088 1088 ntBASIC23.78■■□□□ 1.4
TPM4P67936 AC241585.3-202ENST00000628937 1088 ntBASIC23.78■■□□□ 1.4
TPM4P67936 AC245100.8-202ENST00000629247 1058 ntBASIC23.78■■□□□ 1.4
TPM4P67936 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM4P67936 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM4P67936 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM4P67936 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TPM4P67936 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.77■■□□□ 1.4
TPM4P67936 AC026471.6-201ENST00000622954 1905 ntBASIC23.77■■□□□ 1.4
TPM4P67936 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TPM4P67936 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
TPM4P67936 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.77■■□□□ 1.4
TPM4P67936 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.77■■□□□ 1.4
TPM4P67936 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TPM4P67936 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
TPM4P67936 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM4P67936 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.76■■□□□ 1.39
TPM4P67936 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM4P67936 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TPM4P67936 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM4P67936 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.76■■□□□ 1.39
TPM4P67936 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM4P67936 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TPM4P67936 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TPM4P67936 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TPM4P67936 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms