Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRRX1P54821 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRRX1P54821 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.53■□□□□ 0.4
PRRX1P54821 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRRX1P54821 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.53■□□□□ 0.4
PRRX1P54821 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.53■□□□□ 0.4
PRRX1P54821 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRRX1P54821 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRRX1P54821 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRRX1P54821 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.52■□□□□ 0.4
PRRX1P54821 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 C11orf96-202ENST00000528572 1834 ntBASIC17.52■□□□□ 0.4
PRRX1P54821 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.52■□□□□ 0.4
PRRX1P54821 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.52■□□□□ 0.4
PRRX1P54821 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRRX1P54821 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRRX1P54821 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PRRX1P54821 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.51■□□□□ 0.39
PRRX1P54821 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PRRX1P54821 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 AC009237.3-201ENST00000393279 1427 ntBASIC17.51■□□□□ 0.39
PRRX1P54821 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.51■□□□□ 0.39
PRRX1P54821 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.51■□□□□ 0.39
PRRX1P54821 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.51■□□□□ 0.39
PRRX1P54821 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.51■□□□□ 0.39
PRRX1P54821 BX005040.4-201ENST00000637145 1518 ntBASIC17.51■□□□□ 0.39
PRRX1P54821 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
PRRX1P54821 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRRX1P54821 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.5■□□□□ 0.39
PRRX1P54821 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.5■□□□□ 0.39
PRRX1P54821 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.5■□□□□ 0.39
PRRX1P54821 AC012414.1-201ENST00000556676 535 ntBASIC17.5■□□□□ 0.39
PRRX1P54821 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.5■□□□□ 0.39
PRRX1P54821 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.5■□□□□ 0.39
PRRX1P54821 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.5■□□□□ 0.39
PRRX1P54821 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
PRRX1P54821 EP400NL-214ENST00000641289 2402 ntBASIC17.5■□□□□ 0.39
PRRX1P54821 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRRX1P54821 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.5■□□□□ 0.39
PRRX1P54821 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRRX1P54821 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
PRRX1P54821 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRRX1P54821 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.49■□□□□ 0.39
PRRX1P54821 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.49■□□□□ 0.39
PRRX1P54821 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRRX1P54821 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRRX1P54821 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRRX1P54821 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRRX1P54821 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
PRRX1P54821 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.48■□□□□ 0.39
PRRX1P54821 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PRRX1P54821 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.48■□□□□ 0.39
PRRX1P54821 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRRX1P54821 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PRRX1P54821 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms