Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 YEL032C-AYEL032C-A 162 nt2.85□□□□□ -1.95
UFD1P53044 ISC10YER180C 804 nt2.85□□□□□ -1.95
UFD1P53044 SDS3YIL084C 984 nt2.85□□□□□ -1.95
UFD1P53044 GTT2YLL060C 702 nt2.85□□□□□ -1.95
UFD1P53044 YML047W-AYML047W-A 366 nt2.85□□□□□ -1.95
UFD1P53044 RPL13BYMR142C 600 nt2.85□□□□□ -1.95
UFD1P53044 INN1YNL152W 1230 nt2.85□□□□□ -1.95
UFD1P53044 CPR8YNR028W 927 nt2.85□□□□□ -1.95
UFD1P53044 BUD21YOR078W 645 nt2.85□□□□□ -1.95
UFD1P53044 YPR074W-AYPR074W-A 171 nt2.85□□□□□ -1.95
UFD1P53044 CHK1YBR274W 1584 nt2.85□□□□□ -1.95
UFD1P53044 CUE3YGL110C 1875 nt2.85□□□□□ -1.95
UFD1P53044 YPR148CYPR148C 1308 nt2.85□□□□□ -1.95
UFD1P53044 CDH1YGL003C 1701 nt2.85□□□□□ -1.95
UFD1P53044 HFD1YMR110C 1599 nt2.84□□□□□ -1.95
UFD1P53044 TGL3YMR313C 1929 nt2.84□□□□□ -1.95
UFD1P53044 YGR168CYGR168C 1131 nt2.84□□□□□ -1.95
UFD1P53044 YPT35YHR105W 645 nt2.84□□□□□ -1.95
UFD1P53044 GOT1YMR292W 417 nt2.84□□□□□ -1.95
UFD1P53044 IMP4YNL075W 873 nt2.84□□□□□ -1.95
UFD1P53044 YOR082CYOR082C 342 nt2.84□□□□□ -1.95
UFD1P53044 MRPL51YPR100W 423 nt2.84□□□□□ -1.95
UFD1P53044 HDA2YDR295C 2025 nt2.84□□□□□ -1.95
UFD1P53044 EMP70YLR083C 2004 nt2.84□□□□□ -1.95
UFD1P53044 VTC4YJL012C 2166 nt2.84□□□□□ -1.96
UFD1P53044 NDT80YHR124W 1884 nt2.84□□□□□ -1.96
UFD1P53044 SEC59YMR013C 1560 nt2.83□□□□□ -1.96
UFD1P53044 REC8YPR007C 2043 nt2.83□□□□□ -1.96
UFD1P53044 CET1YPL228W 1650 nt2.83□□□□□ -1.96
UFD1P53044 RIF1YBR275C 5751 nt2.83□□□□□ -1.96
UFD1P53044 PET54YGR222W 882 nt2.83□□□□□ -1.96
UFD1P53044 SAW1YAL027W 786 nt2.83□□□□□ -1.96
UFD1P53044 HOT13YKL084W 351 nt2.83□□□□□ -1.96
UFD1P53044 COQ9YLR201C 783 nt2.83□□□□□ -1.96
UFD1P53044 IZH4YOL101C 939 nt2.83□□□□□ -1.96
UFD1P53044 RPN8YOR261C 1017 nt2.83□□□□□ -1.96
UFD1P53044 CAF20YOR276W 486 nt2.83□□□□□ -1.96
UFD1P53044 ARA1YBR149W 1035 nt2.83□□□□□ -1.96
UFD1P53044 UBS1YBR165W 834 nt2.83□□□□□ -1.96
UFD1P53044 YIG1YPL201C 1386 nt2.83□□□□□ -1.96
UFD1P53044 ARP4YJL081C 1470 nt2.83□□□□□ -1.96
UFD1P53044 SPO14YKR031C 5052 nt2.82□□□□□ -1.96
UFD1P53044 EXO5YBR163W 1758 nt2.82□□□□□ -1.96
UFD1P53044 NHP10YDL002C 612 nt2.82□□□□□ -1.96
UFD1P53044 RPL35BYDL136W 363 nt2.82□□□□□ -1.96
UFD1P53044 IZH1YDR492W 951 nt2.82□□□□□ -1.96
UFD1P53044 YIL156W-AYIL156W-A 402 nt2.82□□□□□ -1.96
UFD1P53044 YJR111CYJR111C 852 nt2.82□□□□□ -1.96
UFD1P53044 SUR1YPL057C 1149 nt2.82□□□□□ -1.96
UFD1P53044 SUP45YBR143C 1314 nt2.82□□□□□ -1.96
UFD1P53044 MIC60YKR016W 1623 nt2.82□□□□□ -1.96
UFD1P53044 CIN8YEL061C 3003 nt2.82□□□□□ -1.96
UFD1P53044 FLO1YAR050W 4614 nt2.81□□□□□ -1.96
UFD1P53044 WBP1YEL002C 1293 nt2.81□□□□□ -1.96
UFD1P53044 RPL30YGL030W 318 nt2.81□□□□□ -1.96
UFD1P53044 LSM12YHR121W 564 nt2.81□□□□□ -1.96
UFD1P53044 YAR075WYAR075W 474 nt2.81□□□□□ -1.96
UFD1P53044 SHQ1YIL104C 1524 nt2.81□□□□□ -1.96
UFD1P53044 YDL176WYDL176W 2127 nt2.8□□□□□ -1.96
UFD1P53044 YNR063WYNR063W 1824 nt2.8□□□□□ -1.96
UFD1P53044 PHO5YBR093C 1404 nt2.8□□□□□ -1.96
UFD1P53044 CMK1YFR014C 1341 nt2.8□□□□□ -1.96
UFD1P53044 YDR090CYDR090C 933 nt2.8□□□□□ -1.96
UFD1P53044 PDS1YDR113C 1122 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)DtK(UUU)D 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)G1tK(UUU)G1 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)G2tK(UUU)G2 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)KtK(UUU)K 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)LtK(UUU)L 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)OtK(UUU)O 73 nt2.8□□□□□ -1.96
UFD1P53044 tK(UUU)PtK(UUU)P 73 nt2.8□□□□□ -1.96
UFD1P53044 AML1YGR001C 747 nt2.8□□□□□ -1.96
UFD1P53044 PPE1YHR075C 1203 nt2.8□□□□□ -1.96
UFD1P53044 YIL102C-AYIL102C-A 228 nt2.8□□□□□ -1.96
UFD1P53044 IRC18YJL037W 675 nt2.8□□□□□ -1.96
UFD1P53044 YJR071WYJR071W 369 nt2.8□□□□□ -1.96
UFD1P53044 YKL162CYKL162C 1209 nt2.8□□□□□ -1.96
UFD1P53044 AHP1YLR109W 531 nt2.8□□□□□ -1.96
UFD1P53044 GAB1YLR459W 1185 nt2.8□□□□□ -1.96
UFD1P53044 YMR122W-AYMR122W-A 255 nt2.8□□□□□ -1.96
UFD1P53044 YNL171CYNL171C 369 nt2.8□□□□□ -1.96
UFD1P53044 SSP2YOR242C 1116 nt2.8□□□□□ -1.96
UFD1P53044 HUT1YPL244C 1020 nt2.8□□□□□ -1.96
UFD1P53044 CTM1YHR109W 1758 nt2.79□□□□□ -1.96
UFD1P53044 DYN1YKR054C 12279 nt2.79□□□□□ -1.96
UFD1P53044 YDL162CYDL162C 357 nt2.79□□□□□ -1.96
UFD1P53044 YDR124WYDR124W 975 nt2.79□□□□□ -1.96
UFD1P53044 VMA8YEL051W 771 nt2.79□□□□□ -1.96
UFD1P53044 FMP32YFL046W 624 nt2.79□□□□□ -1.96
UFD1P53044 PAN5YHR063C 1140 nt2.79□□□□□ -1.96
UFD1P53044 PCD1YLR151C 1023 nt2.79□□□□□ -1.96
UFD1P53044 ERG2YMR202W 669 nt2.79□□□□□ -1.96
UFD1P53044 RRG9YNL213C 645 nt2.79□□□□□ -1.96
UFD1P53044 SSU72YNL222W 621 nt2.79□□□□□ -1.96
UFD1P53044 COS1YNL336W 1146 nt2.79□□□□□ -1.96
UFD1P53044 BAG7YOR134W 1230 nt2.79□□□□□ -1.96
UFD1P53044 RRP7YCL031C 894 nt2.79□□□□□ -1.96
UFD1P53044 MIG1YGL035C 1515 nt2.78□□□□□ -1.96
UFD1P53044 STE6YKL209C 3873 nt2.78□□□□□ -1.96
UFD1P53044 FLO5YHR211W 3228 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms