Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.72■□□□□ 0.91
PDX1P52945 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PDX1P52945 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PDX1P52945 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.71■□□□□ 0.91
PDX1P52945 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.71■□□□□ 0.91
PDX1P52945 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.71■□□□□ 0.91
PDX1P52945 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.71■□□□□ 0.91
PDX1P52945 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
PDX1P52945 AL121832.2-201ENST00000610979 668 ntBASIC20.71■□□□□ 0.91
PDX1P52945 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PDX1P52945 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDX1P52945 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
PDX1P52945 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDX1P52945 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PDX1P52945 AC055733.4-201ENST00000638462 1354 ntBASIC20.71■□□□□ 0.91
PDX1P52945 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDX1P52945 TSPY6P-201ENST00000448518 926 ntBASIC20.7■□□□□ 0.9
PDX1P52945 SLC7A5P2-201ENST00000553010 536 ntBASIC20.7■□□□□ 0.9
PDX1P52945 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
PDX1P52945 AC231657.2-201ENST00000624556 255 ntBASIC20.7■□□□□ 0.9
PDX1P52945 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.7■□□□□ 0.9
PDX1P52945 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.7■□□□□ 0.9
PDX1P52945 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDX1P52945 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.69■□□□□ 0.9
PDX1P52945 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
PDX1P52945 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.69■□□□□ 0.9
PDX1P52945 MYCNOS-205ENST00000641950 531 ntBASIC20.69■□□□□ 0.9
PDX1P52945 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.69■□□□□ 0.9
PDX1P52945 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 AC233723.2-201ENST00000623798 2106 ntBASIC20.69■□□□□ 0.9
PDX1P52945 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.69■□□□□ 0.9
PDX1P52945 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
PDX1P52945 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDX1P52945 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.68■□□□□ 0.9
PDX1P52945 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.68■□□□□ 0.9
PDX1P52945 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.68■□□□□ 0.9
PDX1P52945 AC083906.2-201ENST00000511578 360 ntBASIC20.68■□□□□ 0.9
PDX1P52945 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 AP001160.3-201ENST00000601484 763 ntBASIC20.68■□□□□ 0.9
PDX1P52945 AC005181.1-201ENST00000604782 1256 ntBASIC20.68■□□□□ 0.9
PDX1P52945 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDX1P52945 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDX1P52945 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.67■□□□□ 0.9
PDX1P52945 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.67■□□□□ 0.9
PDX1P52945 CD99P1-205ENST00000527459 561 ntBASIC20.67■□□□□ 0.9
PDX1P52945 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.67■□□□□ 0.9
PDX1P52945 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.67■□□□□ 0.9
PDX1P52945 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDX1P52945 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDX1P52945 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDX1P52945 AC007322.1-201ENST00000426983 750 ntBASIC20.66■□□□□ 0.9
PDX1P52945 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.66■□□□□ 0.9
PDX1P52945 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.66■□□□□ 0.9
PDX1P52945 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms