Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR4P51571 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
SSR4P51571 AP001160.3-201ENST00000601484 763 ntBASIC19.61■□□□□ 0.73
SSR4P51571 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.61■□□□□ 0.73
SSR4P51571 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR4P51571 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSR4P51571 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SSR4P51571 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR4P51571 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SSR4P51571 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SSR4P51571 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR4P51571 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR4P51571 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR4P51571 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.6■□□□□ 0.73
SSR4P51571 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.6■□□□□ 0.73
SSR4P51571 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 BID-214ENST00000617586 542 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR4P51571 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR4P51571 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR4P51571 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR4P51571 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.59■□□□□ 0.73
SSR4P51571 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSR4P51571 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 AC138907.5-202ENST00000569484 235 ntBASIC19.59■□□□□ 0.73
SSR4P51571 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSR4P51571 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.59■□□□□ 0.73
SSR4P51571 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SSR4P51571 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSR4P51571 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSR4P51571 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
SSR4P51571 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
SSR4P51571 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.58■□□□□ 0.72
SSR4P51571 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 AC090192.1-201ENST00000517740 490 ntBASIC19.58■□□□□ 0.72
SSR4P51571 EEF1DP3-203ENST00000566025 782 ntBASIC19.58■□□□□ 0.72
SSR4P51571 AC053503.5-201ENST00000601508 636 ntBASIC19.58■□□□□ 0.72
SSR4P51571 AC080038.1-201ENST00000611274 1154 ntBASIC19.58■□□□□ 0.72
SSR4P51571 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSR4P51571 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SSR4P51571 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.58■□□□□ 0.72
SSR4P51571 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR4P51571 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 AC010141.2-201ENST00000452426 721 ntBASIC19.57■□□□□ 0.72
SSR4P51571 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SSR4P51571 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.57■□□□□ 0.72
SSR4P51571 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.57■□□□□ 0.72
SSR4P51571 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.57■□□□□ 0.72
SSR4P51571 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR4P51571 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSR4P51571 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSR4P51571 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.57■□□□□ 0.72
SSR4P51571 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR4P51571 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SSR4P51571 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR4P51571 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR4P51571 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.56■□□□□ 0.72
SSR4P51571 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SSR4P51571 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SSR4P51571 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR4P51571 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms