Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC022211.4-201ENST00000625094 2161 ntBASIC19.72■□□□□ 0.75
ATRXP46100 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.72■□□□□ 0.75
ATRXP46100 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRXP46100 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRXP46100 UPK3BP1-201ENST00000428678 509 ntBASIC19.72■□□□□ 0.75
ATRXP46100 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATRXP46100 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.72■□□□□ 0.75
ATRXP46100 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRXP46100 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRXP46100 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.72■□□□□ 0.75
ATRXP46100 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ATRXP46100 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
ATRXP46100 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.71■□□□□ 0.75
ATRXP46100 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.71■□□□□ 0.75
ATRXP46100 AC008694.1-202ENST00000636953 945 ntBASIC19.71■□□□□ 0.75
ATRXP46100 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATRXP46100 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ATRXP46100 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRXP46100 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.71■□□□□ 0.75
ATRXP46100 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRXP46100 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATRXP46100 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATRXP46100 AC068587.7-201ENST00000641602 218 ntBASIC19.71■□□□□ 0.75
ATRXP46100 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.71■□□□□ 0.75
ATRXP46100 AL512625.2-201ENST00000417533 625 ntBASIC19.7■□□□□ 0.74
ATRXP46100 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
ATRXP46100 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.7■□□□□ 0.74
ATRXP46100 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.7■□□□□ 0.74
ATRXP46100 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRXP46100 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATRXP46100 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRXP46100 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATRXP46100 AL121749.1-202ENST00000609313 2153 ntBASIC19.7■□□□□ 0.74
ATRXP46100 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.7■□□□□ 0.74
ATRXP46100 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRXP46100 AC010141.3-201ENST00000456659 717 ntBASIC19.69■□□□□ 0.74
ATRXP46100 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.69■□□□□ 0.74
ATRXP46100 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRXP46100 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRXP46100 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRXP46100 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATRXP46100 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.69■□□□□ 0.74
ATRXP46100 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.69■□□□□ 0.74
ATRXP46100 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.69■□□□□ 0.74
ATRXP46100 C1QBPP2-201ENST00000528754 825 ntBASIC19.69■□□□□ 0.74
ATRXP46100 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.69■□□□□ 0.74
ATRXP46100 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.69■□□□□ 0.74
ATRXP46100 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ATRXP46100 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
ATRXP46100 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.69■□□□□ 0.74
ATRXP46100 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.69■□□□□ 0.74
ATRXP46100 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.68■□□□□ 0.74
ATRXP46100 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.68■□□□□ 0.74
ATRXP46100 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.68■□□□□ 0.74
ATRXP46100 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.68■□□□□ 0.74
ATRXP46100 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.68■□□□□ 0.74
ATRXP46100 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.68■□□□□ 0.74
ATRXP46100 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATRXP46100 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.68■□□□□ 0.74
ATRXP46100 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.67■□□□□ 0.74
ATRXP46100 NTF6B-201ENST00000591913 560 ntBASIC19.67■□□□□ 0.74
ATRXP46100 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ATRXP46100 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.67■□□□□ 0.74
ATRXP46100 TERF1P5-201ENST00000477545 1207 ntBASIC19.67■□□□□ 0.74
ATRXP46100 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATRXP46100 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.67■□□□□ 0.74
ATRXP46100 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.67■□□□□ 0.74
ATRXP46100 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATRXP46100 AIRN-201ENST00000601203 4374 ntBASIC19.66■□□□□ 0.74
ATRXP46100 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ATRXP46100 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.66■□□□□ 0.74
ATRXP46100 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATRXP46100 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATRXP46100 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ATRXP46100 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATRXP46100 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.66■□□□□ 0.74
ATRXP46100 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATRXP46100 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATRXP46100 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATRXP46100 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.65■□□□□ 0.74
ATRXP46100 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.65■□□□□ 0.74
ATRXP46100 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.65■□□□□ 0.74
ATRXP46100 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.65■□□□□ 0.74
ATRXP46100 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATRXP46100 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATRXP46100 AP000593.1-201ENST00000393668 712 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms