Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFC3P40938 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RFC3P40938 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RFC3P40938 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC3P40938 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.49■□□□□ 0.71
RFC3P40938 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 C1orf229-201ENST00000623686 2258 ntBASIC19.49■□□□□ 0.71
RFC3P40938 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RFC3P40938 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
RFC3P40938 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC3P40938 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.48■□□□□ 0.71
RFC3P40938 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.48■□□□□ 0.71
RFC3P40938 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.48■□□□□ 0.71
RFC3P40938 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC3P40938 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC3P40938 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC3P40938 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.48■□□□□ 0.71
RFC3P40938 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.48■□□□□ 0.71
RFC3P40938 RAP2CP1-201ENST00000605103 478 ntBASIC19.48■□□□□ 0.71
RFC3P40938 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC3P40938 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC3P40938 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFC3P40938 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFC3P40938 HLA-L-209ENST00000420110 1011 ntBASIC19.47■□□□□ 0.71
RFC3P40938 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.47■□□□□ 0.71
RFC3P40938 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.47■□□□□ 0.71
RFC3P40938 UBE2DNL-204ENST00000602536 740 ntBASIC19.47■□□□□ 0.71
RFC3P40938 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
RFC3P40938 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC3P40938 AC139530.1-201ENST00000575312 1977 ntBASIC19.46■□□□□ 0.71
RFC3P40938 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC3P40938 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC3P40938 AC026185.1-201ENST00000445748 174 ntBASIC19.46■□□□□ 0.71
RFC3P40938 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.46■□□□□ 0.71
RFC3P40938 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC3P40938 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC3P40938 AP001160.3-201ENST00000601484 763 ntBASIC19.46■□□□□ 0.71
RFC3P40938 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC3P40938 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFC3P40938 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC3P40938 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RFC3P40938 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC3P40938 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC3P40938 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC3P40938 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC3P40938 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RFC3P40938 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
RFC3P40938 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC3P40938 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFC3P40938 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFC3P40938 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFC3P40938 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC3P40938 KRT18P11-201ENST00000435214 1283 ntBASIC19.44■□□□□ 0.7
RFC3P40938 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC3P40938 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC3P40938 MFSD11-216ENST00000590393 1141 ntBASIC19.44■□□□□ 0.7
RFC3P40938 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC3P40938 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 AP006587.3-201ENST00000525742 1516 ntBASIC19.44■□□□□ 0.7
RFC3P40938 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC3P40938 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RFC3P40938 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC3P40938 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC3P40938 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.43■□□□□ 0.7
RFC3P40938 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC3P40938 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC3P40938 AC006970.2-201ENST00000450065 779 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms