Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.37■□□□□ 0.37
CEACAM3P40198 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CEACAM3P40198 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CEACAM3P40198 AC123595.1-201ENST00000440769 1046 ntBASIC17.37■□□□□ 0.37
CEACAM3P40198 YBX1P1-201ENST00000445822 960 ntBASIC17.37■□□□□ 0.37
CEACAM3P40198 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CEACAM3P40198 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CEACAM3P40198 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 LINC02228-203ENST00000641970 1355 ntBASIC17.37■□□□□ 0.37
CEACAM3P40198 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.37■□□□□ 0.37
CEACAM3P40198 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CEACAM3P40198 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.36■□□□□ 0.37
CEACAM3P40198 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.36■□□□□ 0.37
CEACAM3P40198 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.36■□□□□ 0.37
CEACAM3P40198 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.36■□□□□ 0.37
CEACAM3P40198 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CEACAM3P40198 AC005224.4-201ENST00000583262 1652 ntBASIC17.36■□□□□ 0.37
CEACAM3P40198 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CEACAM3P40198 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.35■□□□□ 0.37
CEACAM3P40198 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.35■□□□□ 0.37
CEACAM3P40198 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.35■□□□□ 0.37
CEACAM3P40198 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.35■□□□□ 0.37
CEACAM3P40198 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.35■□□□□ 0.37
CEACAM3P40198 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CEACAM3P40198 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CEACAM3P40198 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CEACAM3P40198 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CEACAM3P40198 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CEACAM3P40198 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CEACAM3P40198 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CEACAM3P40198 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CEACAM3P40198 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.34■□□□□ 0.37
CEACAM3P40198 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.34■□□□□ 0.37
CEACAM3P40198 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.34■□□□□ 0.37
CEACAM3P40198 AP006587.3-201ENST00000525742 1516 ntBASIC17.34■□□□□ 0.37
CEACAM3P40198 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CEACAM3P40198 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.34■□□□□ 0.37
CEACAM3P40198 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.34■□□□□ 0.37
CEACAM3P40198 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CEACAM3P40198 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CEACAM3P40198 C11orf96-202ENST00000528572 1834 ntBASIC17.33■□□□□ 0.37
CEACAM3P40198 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CEACAM3P40198 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CEACAM3P40198 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.33■□□□□ 0.36
CEACAM3P40198 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.33■□□□□ 0.36
CEACAM3P40198 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CEACAM3P40198 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.33■□□□□ 0.36
CEACAM3P40198 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.33■□□□□ 0.36
CEACAM3P40198 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CEACAM3P40198 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CEACAM3P40198 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.32■□□□□ 0.36
CEACAM3P40198 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.32■□□□□ 0.36
CEACAM3P40198 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 FAM99A-202ENST00000538190 1989 ntBASIC17.32■□□□□ 0.36
CEACAM3P40198 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
CEACAM3P40198 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.32■□□□□ 0.36
CEACAM3P40198 TPRG1LP1-201ENST00000598702 760 ntBASIC17.32■□□□□ 0.36
CEACAM3P40198 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.32■□□□□ 0.36
CEACAM3P40198 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.32■□□□□ 0.36
CEACAM3P40198 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.32■□□□□ 0.36
CEACAM3P40198 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CEACAM3P40198 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.32■□□□□ 0.36
CEACAM3P40198 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms