Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CLCN1P35523 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CLCN1P35523 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CLCN1P35523 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.18■■□□□ 1.46
CLCN1P35523 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CLCN1P35523 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CLCN1P35523 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.18■■□□□ 1.46
CLCN1P35523 AC092028.1-203ENST00000608262 953 ntBASIC24.18■■□□□ 1.46
CLCN1P35523 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.18■■□□□ 1.46
CLCN1P35523 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.18■■□□□ 1.46
CLCN1P35523 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CLCN1P35523 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.18■■□□□ 1.46
CLCN1P35523 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLCN1P35523 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CLCN1P35523 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.17■■□□□ 1.46
CLCN1P35523 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.17■■□□□ 1.46
CLCN1P35523 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 MIR6722-201ENST00000617286 78 ntBASIC24.17■■□□□ 1.46
CLCN1P35523 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CLCN1P35523 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLCN1P35523 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.16■■□□□ 1.46
CLCN1P35523 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.16■■□□□ 1.46
CLCN1P35523 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CLCN1P35523 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CLCN1P35523 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.16■■□□□ 1.46
CLCN1P35523 AC239859.2-201ENST00000444165 318 ntBASIC24.16■■□□□ 1.46
CLCN1P35523 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.16■■□□□ 1.46
CLCN1P35523 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CLCN1P35523 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLCN1P35523 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC24.16■■□□□ 1.46
CLCN1P35523 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CLCN1P35523 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CLCN1P35523 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC24.15■■□□□ 1.46
CLCN1P35523 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.15■■□□□ 1.46
CLCN1P35523 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
CLCN1P35523 MIR4787-201ENST00000607364 84 ntBASIC24.15■■□□□ 1.46
CLCN1P35523 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLCN1P35523 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.14■■□□□ 1.46
CLCN1P35523 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLCN1P35523 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
CLCN1P35523 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CLCN1P35523 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLCN1P35523 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.14■■□□□ 1.45
CLCN1P35523 KRT125P-201ENST00000546827 989 ntBASIC24.14■■□□□ 1.45
CLCN1P35523 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.14■■□□□ 1.45
CLCN1P35523 LETM1P2-201ENST00000597330 2178 ntBASIC24.14■■□□□ 1.45
CLCN1P35523 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CLCN1P35523 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLCN1P35523 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLCN1P35523 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
CLCN1P35523 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC24.13■■□□□ 1.45
CLCN1P35523 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.13■■□□□ 1.45
CLCN1P35523 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.13■■□□□ 1.45
CLCN1P35523 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CLCN1P35523 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLCN1P35523 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.12■■□□□ 1.45
CLCN1P35523 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.12■■□□□ 1.45
CLCN1P35523 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLCN1P35523 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLCN1P35523 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms