Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 AF131216.4-201ENST00000638924 1588 ntBASIC15.66■□□□□ 0.1
CKS2P33552 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.66■□□□□ 0.1
CKS2P33552 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CKS2P33552 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CKS2P33552 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.65■□□□□ 0.1
CKS2P33552 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CKS2P33552 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.65■□□□□ 0.1
CKS2P33552 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.65■□□□□ 0.1
CKS2P33552 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CKS2P33552 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CKS2P33552 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CKS2P33552 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CKS2P33552 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
CKS2P33552 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CKS2P33552 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.64■□□□□ 0.09
CKS2P33552 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CKS2P33552 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.64■□□□□ 0.09
CKS2P33552 AC007952.6-201ENST00000573168 2673 ntBASIC15.64■□□□□ 0.09
CKS2P33552 AC003957.1-201ENST00000625108 2673 ntBASIC15.64■□□□□ 0.09
CKS2P33552 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CKS2P33552 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.64■□□□□ 0.09
CKS2P33552 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CKS2P33552 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.64■□□□□ 0.09
CKS2P33552 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.64■□□□□ 0.09
CKS2P33552 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS2P33552 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CKS2P33552 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.63■□□□□ 0.09
CKS2P33552 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CKS2P33552 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS2P33552 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.62■□□□□ 0.09
CKS2P33552 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CKS2P33552 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.62■□□□□ 0.09
CKS2P33552 FEM1AP1-201ENST00000431297 1995 ntBASIC15.62■□□□□ 0.09
CKS2P33552 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CKS2P33552 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.62■□□□□ 0.09
CKS2P33552 AC120024.1-201ENST00000562672 995 ntBASIC15.62■□□□□ 0.09
CKS2P33552 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.62■□□□□ 0.09
CKS2P33552 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.62■□□□□ 0.09
CKS2P33552 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.62■□□□□ 0.09
CKS2P33552 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.62■□□□□ 0.09
CKS2P33552 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS2P33552 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CKS2P33552 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.61■□□□□ 0.09
CKS2P33552 AC104564.3-201ENST00000582367 638 ntBASIC15.61■□□□□ 0.09
CKS2P33552 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.61■□□□□ 0.09
CKS2P33552 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS2P33552 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms