Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 AC120024.1-201ENST00000562672 995 ntBASIC17.05■□□□□ 0.32
ATP6V0CP27449 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.05■□□□□ 0.32
ATP6V0CP27449 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 DUX4L4-201ENST00000566884 1269 ntBASIC17.04■□□□□ 0.32
ATP6V0CP27449 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.04■□□□□ 0.32
ATP6V0CP27449 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATP6V0CP27449 AFG3L1P-217ENST00000557444 2447 ntBASIC17.04■□□□□ 0.32
ATP6V0CP27449 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 AL049796.1-201ENST00000565336 1766 ntBASIC17.03■□□□□ 0.32
ATP6V0CP27449 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATP6V0CP27449 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATP6V0CP27449 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0CP27449 PCDHAC2-203ENST00000615316 3011 ntBASIC17.02■□□□□ 0.32
ATP6V0CP27449 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0CP27449 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 C17orf82-201ENST00000623772 1530 ntBASIC17.02■□□□□ 0.32
ATP6V0CP27449 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0CP27449 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0CP27449 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATP6V0CP27449 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.02■□□□□ 0.32
ATP6V0CP27449 MIR4281-201ENST00000580852 62 ntBASIC17.02■□□□□ 0.32
ATP6V0CP27449 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0CP27449 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.02■□□□□ 0.31
ATP6V0CP27449 AP005212.1-201ENST00000581547 1997 ntBASIC17.02■□□□□ 0.31
ATP6V0CP27449 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0CP27449 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.02■□□□□ 0.31
ATP6V0CP27449 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATP6V0CP27449 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP6V0CP27449 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATP6V0CP27449 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0CP27449 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATP6V0CP27449 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0CP27449 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0CP27449 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0CP27449 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
ATP6V0CP27449 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0CP27449 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms