Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
VARSP26640 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.89■□□□□ 0.93
VARSP26640 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.89■□□□□ 0.93
VARSP26640 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.88■□□□□ 0.93
VARSP26640 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VARSP26640 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.88■□□□□ 0.93
VARSP26640 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.88■□□□□ 0.93
VARSP26640 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VARSP26640 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VARSP26640 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.87■□□□□ 0.93
VARSP26640 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VARSP26640 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VARSP26640 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VARSP26640 AC099791.1-201ENST00000416440 715 ntBASIC20.87■□□□□ 0.93
VARSP26640 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.87■□□□□ 0.93
VARSP26640 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 AC126544.1-201ENST00000580842 1059 ntBASIC20.87■□□□□ 0.93
VARSP26640 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 OXCT2P1-201ENST00000447263 1535 ntBASIC20.87■□□□□ 0.93
VARSP26640 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VARSP26640 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
VARSP26640 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 AC087623.3-201ENST00000607047 1098 ntBASIC20.86■□□□□ 0.93
VARSP26640 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.86■□□□□ 0.93
VARSP26640 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VARSP26640 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.86■□□□□ 0.93
VARSP26640 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARSP26640 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.85■□□□□ 0.93
VARSP26640 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VARSP26640 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.85■□□□□ 0.93
VARSP26640 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
VARSP26640 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 OR7E47P-201ENST00000546390 1422 ntBASIC20.85■□□□□ 0.93
VARSP26640 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
VARSP26640 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARSP26640 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.84■□□□□ 0.93
VARSP26640 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.84■□□□□ 0.93
VARSP26640 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.84■□□□□ 0.93
VARSP26640 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.84■□□□□ 0.93
VARSP26640 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.84■□□□□ 0.93
VARSP26640 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARSP26640 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
VARSP26640 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.84■□□□□ 0.93
VARSP26640 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VARSP26640 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.83■□□□□ 0.93
VARSP26640 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VARSP26640 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VARSP26640 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARSP26640 FAM99A-202ENST00000538190 1989 ntBASIC20.83■□□□□ 0.93
VARSP26640 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.83■□□□□ 0.93
VARSP26640 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARSP26640 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARSP26640 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
VARSP26640 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms