Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NCK1P16333 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
NCK1P16333 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.12■□□□□ 0.81
NCK1P16333 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
NCK1P16333 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
NCK1P16333 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NCK1P16333 OR7E47P-201ENST00000546390 1422 ntBASIC20.12■□□□□ 0.81
NCK1P16333 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
NCK1P16333 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NCK1P16333 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NCK1P16333 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.12■□□□□ 0.81
NCK1P16333 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NCK1P16333 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.12■□□□□ 0.81
NCK1P16333 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NCK1P16333 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NCK1P16333 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.11■□□□□ 0.81
NCK1P16333 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NCK1P16333 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.11■□□□□ 0.81
NCK1P16333 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.11■□□□□ 0.81
NCK1P16333 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.11■□□□□ 0.81
NCK1P16333 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NCK1P16333 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.1■□□□□ 0.81
NCK1P16333 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.1■□□□□ 0.81
NCK1P16333 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.1■□□□□ 0.81
NCK1P16333 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCK1P16333 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.1■□□□□ 0.81
NCK1P16333 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCK1P16333 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
NCK1P16333 AL451085.2-201ENST00000605085 799 ntBASIC20.09■□□□□ 0.81
NCK1P16333 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.09■□□□□ 0.81
NCK1P16333 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCK1P16333 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCK1P16333 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCK1P16333 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.09■□□□□ 0.81
NCK1P16333 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.09■□□□□ 0.81
NCK1P16333 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCK1P16333 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCK1P16333 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCK1P16333 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NCK1P16333 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.08■□□□□ 0.81
NCK1P16333 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NCK1P16333 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.08■□□□□ 0.81
NCK1P16333 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NCK1P16333 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.08■□□□□ 0.8
NCK1P16333 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NCK1P16333 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NCK1P16333 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCK1P16333 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.07■□□□□ 0.8
NCK1P16333 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NCK1P16333 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.07■□□□□ 0.8
NCK1P16333 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.07■□□□□ 0.8
NCK1P16333 FEM1AP1-201ENST00000431297 1995 ntBASIC20.07■□□□□ 0.8
NCK1P16333 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCK1P16333 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCK1P16333 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.07■□□□□ 0.8
NCK1P16333 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.07■□□□□ 0.8
NCK1P16333 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCK1P16333 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.07■□□□□ 0.8
NCK1P16333 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.07■□□□□ 0.8
NCK1P16333 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NCK1P16333 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCK1P16333 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NCK1P16333 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCK1P16333 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
NCK1P16333 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NCK1P16333 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NCK1P16333 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms