Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM3P0C091 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FREM3P0C091 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 AC004911.1-201ENST00000416316 871 ntBASIC19.43■□□□□ 0.7
FREM3P0C091 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.43■□□□□ 0.7
FREM3P0C091 OXCT2P1-201ENST00000447263 1535 ntBASIC19.43■□□□□ 0.7
FREM3P0C091 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
FREM3P0C091 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FREM3P0C091 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.43■□□□□ 0.7
FREM3P0C091 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FREM3P0C091 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
FREM3P0C091 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FREM3P0C091 NTF6G-201ENST00000591094 616 ntBASIC19.42■□□□□ 0.7
FREM3P0C091 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FREM3P0C091 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FREM3P0C091 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.42■□□□□ 0.7
FREM3P0C091 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.42■□□□□ 0.7
FREM3P0C091 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.42■□□□□ 0.7
FREM3P0C091 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.42■□□□□ 0.7
FREM3P0C091 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
FREM3P0C091 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FREM3P0C091 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FREM3P0C091 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FREM3P0C091 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FREM3P0C091 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.4■□□□□ 0.7
FREM3P0C091 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 RARRES2P11-201ENST00000635158 484 ntBASIC19.4■□□□□ 0.7
FREM3P0C091 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 ECEL1P1-201ENST00000373592 1742 ntBASIC19.4■□□□□ 0.7
FREM3P0C091 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 AP006587.3-201ENST00000525742 1516 ntBASIC19.4■□□□□ 0.7
FREM3P0C091 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FREM3P0C091 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
FREM3P0C091 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FREM3P0C091 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FREM3P0C091 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
FREM3P0C091 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
FREM3P0C091 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.39■□□□□ 0.69
FREM3P0C091 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
FREM3P0C091 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.39■□□□□ 0.69
FREM3P0C091 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.39■□□□□ 0.69
FREM3P0C091 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.39■□□□□ 0.69
FREM3P0C091 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
FREM3P0C091 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FREM3P0C091 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.39■□□□□ 0.69
FREM3P0C091 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FREM3P0C091 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
FREM3P0C091 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
FREM3P0C091 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.38■□□□□ 0.69
FREM3P0C091 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FREM3P0C091 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.38■□□□□ 0.69
FREM3P0C091 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.38■□□□□ 0.69
FREM3P0C091 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FREM3P0C091 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms