Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
SNRPA1P09661 TERF1P5-201ENST00000477545 1207 ntBASIC27.37■■□□□ 1.97
SNRPA1P09661 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.37■■□□□ 1.97
SNRPA1P09661 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNRPA1P09661 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.36■■□□□ 1.97
SNRPA1P09661 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
SNRPA1P09661 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.36■■□□□ 1.97
SNRPA1P09661 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.36■■□□□ 1.97
SNRPA1P09661 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SNRPA1P09661 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNRPA1P09661 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
SNRPA1P09661 AC133552.2-202ENST00000575694 574 ntBASIC27.35■■□□□ 1.97
SNRPA1P09661 AC013268.1-206ENST00000638368 961 ntBASIC27.35■■□□□ 1.97
SNRPA1P09661 AC112229.1-201ENST00000639295 961 ntBASIC27.35■■□□□ 1.97
SNRPA1P09661 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.35■■□□□ 1.97
SNRPA1P09661 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNRPA1P09661 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNRPA1P09661 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.34■■□□□ 1.97
SNRPA1P09661 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
SNRPA1P09661 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
SNRPA1P09661 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNRPA1P09661 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNRPA1P09661 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNRPA1P09661 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNRPA1P09661 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNRPA1P09661 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNRPA1P09661 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SNRPA1P09661 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SNRPA1P09661 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNRPA1P09661 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
SNRPA1P09661 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
SNRPA1P09661 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SNRPA1P09661 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.33■■□□□ 1.97
SNRPA1P09661 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNRPA1P09661 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.33■■□□□ 1.97
SNRPA1P09661 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SNRPA1P09661 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.33■■□□□ 1.97
SNRPA1P09661 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
SNRPA1P09661 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
SNRPA1P09661 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.32■■□□□ 1.96
SNRPA1P09661 AF201337.1-201ENST00000520239 748 ntBASIC27.32■■□□□ 1.96
SNRPA1P09661 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC27.32■■□□□ 1.96
SNRPA1P09661 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SNRPA1P09661 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNRPA1P09661 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SNRPA1P09661 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SNRPA1P09661 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SNRPA1P09661 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.31■■□□□ 1.96
SNRPA1P09661 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNRPA1P09661 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.31■■□□□ 1.96
SNRPA1P09661 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.31■■□□□ 1.96
SNRPA1P09661 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.31■■□□□ 1.96
SNRPA1P09661 AL138781.1-201ENST00000566567 1274 ntBASIC27.31■■□□□ 1.96
SNRPA1P09661 AC008175.2-201ENST00000612840 297 ntBASIC27.31■■□□□ 1.96
SNRPA1P09661 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
SNRPA1P09661 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SNRPA1P09661 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNRPA1P09661 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.3■■□□□ 1.96
SNRPA1P09661 SLC29A4P1-201ENST00000398760 971 ntBASIC27.3■■□□□ 1.96
SNRPA1P09661 AC007322.4-201ENST00000509611 723 ntBASIC27.3■■□□□ 1.96
SNRPA1P09661 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.3■■□□□ 1.96
SNRPA1P09661 AC068338.2-201ENST00000563278 1430 ntBASIC27.3■■□□□ 1.96
SNRPA1P09661 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNRPA1P09661 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.29■■□□□ 1.96
SNRPA1P09661 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.29■■□□□ 1.96
SNRPA1P09661 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNRPA1P09661 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.29■■□□□ 1.96
SNRPA1P09661 AC105036.2-201ENST00000569468 176 ntBASIC27.29■■□□□ 1.96
SNRPA1P09661 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SNRPA1P09661 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNRPA1P09661 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
SNRPA1P09661 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNRPA1P09661 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SNRPA1P09661 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
SNRPA1P09661 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SNRPA1P09661 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms