Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.7■□□□□ 0.42
CTSDP07339 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.69■□□□□ 0.42
CTSDP07339 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CTSDP07339 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.69■□□□□ 0.42
CTSDP07339 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.69■□□□□ 0.42
CTSDP07339 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.69■□□□□ 0.42
CTSDP07339 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSDP07339 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTSDP07339 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.68■□□□□ 0.42
CTSDP07339 AL049796.1-201ENST00000565336 1766 ntBASIC17.68■□□□□ 0.42
CTSDP07339 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CTSDP07339 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSDP07339 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CTSDP07339 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.68■□□□□ 0.42
CTSDP07339 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.68■□□□□ 0.42
CTSDP07339 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSDP07339 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.67■□□□□ 0.42
CTSDP07339 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.67■□□□□ 0.42
CTSDP07339 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.67■□□□□ 0.42
CTSDP07339 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTSDP07339 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTSDP07339 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSDP07339 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTSDP07339 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.66■□□□□ 0.42
CTSDP07339 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTSDP07339 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTSDP07339 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.66■□□□□ 0.42
CTSDP07339 AL031848.2-201ENST00000607670 837 ntBASIC17.66■□□□□ 0.42
CTSDP07339 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.66■□□□□ 0.42
CTSDP07339 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTSDP07339 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTSDP07339 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSDP07339 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.65■□□□□ 0.42
CTSDP07339 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTSDP07339 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTSDP07339 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CTSDP07339 BX664725.1-201ENST00000438252 379 ntBASIC17.65■□□□□ 0.42
CTSDP07339 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.65■□□□□ 0.42
CTSDP07339 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSDP07339 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.65■□□□□ 0.42
CTSDP07339 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSDP07339 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTSDP07339 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTSDP07339 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTSDP07339 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTSDP07339 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CTSDP07339 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSDP07339 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CTSDP07339 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSDP07339 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSDP07339 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.64■□□□□ 0.41
CTSDP07339 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTSDP07339 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms