Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQB2P05538 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQB2P05538 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQB2P05538 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQB2P05538 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 AC055733.4-201ENST00000638462 1354 ntBASIC21.7■■□□□ 1.06
HLA-DQB2P05538 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQB2P05538 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 AC027612.3-201ENST00000413684 1047 ntBASIC21.69■■□□□ 1.06
HLA-DQB2P05538 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQB2P05538 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HLA-DQB2P05538 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.67■■□□□ 1.06
HLA-DQB2P05538 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQB2P05538 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.65■■□□□ 1.06
HLA-DQB2P05538 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQB2P05538 AC244015.2-201ENST00000616358 1861 ntBASIC21.64■■□□□ 1.06
HLA-DQB2P05538 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQB2P05538 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 AC104564.3-201ENST00000582367 638 ntBASIC21.64■■□□□ 1.05
HLA-DQB2P05538 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DQB2P05538 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQB2P05538 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms