Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.86■□□□□ 0.93
RPLP0P05388 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.85■□□□□ 0.93
RPLP0P05388 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.85■□□□□ 0.93
RPLP0P05388 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.85■□□□□ 0.93
RPLP0P05388 AC104771.1-201ENST00000603335 964 ntBASIC20.85■□□□□ 0.93
RPLP0P05388 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.85■□□□□ 0.93
RPLP0P05388 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPLP0P05388 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.85■□□□□ 0.93
RPLP0P05388 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.85■□□□□ 0.93
RPLP0P05388 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RPLP0P05388 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.84■□□□□ 0.93
RPLP0P05388 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.84■□□□□ 0.93
RPLP0P05388 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
RPLP0P05388 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.84■□□□□ 0.93
RPLP0P05388 MIR663A-201ENST00000385250 93 ntBASIC20.84■□□□□ 0.93
RPLP0P05388 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.84■□□□□ 0.93
RPLP0P05388 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.84■□□□□ 0.93
RPLP0P05388 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.84■□□□□ 0.93
RPLP0P05388 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPLP0P05388 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.84■□□□□ 0.93
RPLP0P05388 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPLP0P05388 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPLP0P05388 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPLP0P05388 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPLP0P05388 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPLP0P05388 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPLP0P05388 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
RPLP0P05388 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.83■□□□□ 0.92
RPLP0P05388 LINC01960-201ENST00000563759 1884 ntBASIC20.83■□□□□ 0.92
RPLP0P05388 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
RPLP0P05388 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RPLP0P05388 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPLP0P05388 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPLP0P05388 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPLP0P05388 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.82■□□□□ 0.92
RPLP0P05388 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.82■□□□□ 0.92
RPLP0P05388 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.82■□□□□ 0.92
RPLP0P05388 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 AL109923.1-201ENST00000618799 583 ntBASIC20.82■□□□□ 0.92
RPLP0P05388 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
RPLP0P05388 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RPLP0P05388 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPLP0P05388 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.81■□□□□ 0.92
RPLP0P05388 AL355802.2-201ENST00000402069 882 ntBASIC20.81■□□□□ 0.92
RPLP0P05388 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.81■□□□□ 0.92
RPLP0P05388 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.81■□□□□ 0.92
RPLP0P05388 MFSD11-216ENST00000590393 1141 ntBASIC20.81■□□□□ 0.92
RPLP0P05388 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.81■□□□□ 0.92
RPLP0P05388 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPLP0P05388 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPLP0P05388 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPLP0P05388 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
RPLP0P05388 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.8■□□□□ 0.92
RPLP0P05388 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.8■□□□□ 0.92
RPLP0P05388 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.8■□□□□ 0.92
RPLP0P05388 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.8■□□□□ 0.92
RPLP0P05388 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPLP0P05388 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPLP0P05388 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPLP0P05388 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPLP0P05388 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPLP0P05388 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.79■□□□□ 0.92
RPLP0P05388 AC079089.2-201ENST00000531211 1277 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms