Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.51■□□□□ 0.71
P04436 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.51■□□□□ 0.71
P04436 KRT18P11-201ENST00000435214 1283 ntBASIC19.51■□□□□ 0.71
P04436 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
P04436 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.51■□□□□ 0.71
P04436 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.51■□□□□ 0.71
P04436 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
P04436 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.51■□□□□ 0.71
P04436 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.51■□□□□ 0.71
P04436 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
P04436 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04436 AC080038.3-201ENST00000623346 1952 ntBASIC19.5■□□□□ 0.71
P04436 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.5■□□□□ 0.71
P04436 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.5■□□□□ 0.71
P04436 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 AC006015.1-201ENST00000429970 570 ntBASIC19.5■□□□□ 0.71
P04436 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.5■□□□□ 0.71
P04436 AC092053.2-201ENST00000640557 1818 ntBASIC19.5■□□□□ 0.71
P04436 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
P04436 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04436 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.5■□□□□ 0.71
P04436 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.49■□□□□ 0.71
P04436 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
P04436 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.49■□□□□ 0.71
P04436 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.49■□□□□ 0.71
P04436 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 RARRES2P11-201ENST00000635158 484 ntBASIC19.49■□□□□ 0.71
P04436 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04436 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04436 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.48■□□□□ 0.71
P04436 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
P04436 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.48■□□□□ 0.71
P04436 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
P04436 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.48■□□□□ 0.71
P04436 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.48■□□□□ 0.71
P04436 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.48■□□□□ 0.71
P04436 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.48■□□□□ 0.71
P04436 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04436 AP001160.3-201ENST00000601484 763 ntBASIC19.48■□□□□ 0.71
P04436 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
P04436 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04436 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.48■□□□□ 0.71
P04436 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04436 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.48■□□□□ 0.71
P04436 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
P04436 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.47■□□□□ 0.71
P04436 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
P04436 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
P04436 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
P04436 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.47■□□□□ 0.71
P04436 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.47■□□□□ 0.71
P04436 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.47■□□□□ 0.71
P04436 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.47■□□□□ 0.71
P04436 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.47■□□□□ 0.71
P04436 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 BID-214ENST00000617586 542 ntTSL 5 BASIC19.47■□□□□ 0.71
P04436 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.47■□□□□ 0.71
P04436 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04436 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.46■□□□□ 0.71
P04436 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.46■□□□□ 0.71
P04436 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.46■□□□□ 0.71
P04436 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.46■□□□□ 0.71
P04436 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.46■□□□□ 0.71
P04436 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
P04436 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms