Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.37■■□□□ 1.33
CHRNA1P02708 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHRNA1P02708 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHRNA1P02708 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHRNA1P02708 AC093323.1-202ENST00000635031 2045 ntBASIC23.37■■□□□ 1.33
CHRNA1P02708 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CHRNA1P02708 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CHRNA1P02708 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.37■■□□□ 1.33
CHRNA1P02708 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CHRNA1P02708 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.37■■□□□ 1.33
CHRNA1P02708 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.37■■□□□ 1.33
CHRNA1P02708 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.37■■□□□ 1.33
CHRNA1P02708 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.37■■□□□ 1.33
CHRNA1P02708 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.37■■□□□ 1.33
CHRNA1P02708 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CHRNA1P02708 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.36■■□□□ 1.33
CHRNA1P02708 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.36■■□□□ 1.33
CHRNA1P02708 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.36■■□□□ 1.33
CHRNA1P02708 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.36■■□□□ 1.33
CHRNA1P02708 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CHRNA1P02708 AC139530.1-201ENST00000575312 1977 ntBASIC23.35■■□□□ 1.33
CHRNA1P02708 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHRNA1P02708 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHRNA1P02708 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CHRNA1P02708 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CHRNA1P02708 AC073210.2-201ENST00000430369 194 ntBASIC23.35■■□□□ 1.33
CHRNA1P02708 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.35■■□□□ 1.33
CHRNA1P02708 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.35■■□□□ 1.33
CHRNA1P02708 AC133041.1-202ENST00000642053 222 ntBASIC23.35■■□□□ 1.33
CHRNA1P02708 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.35■■□□□ 1.33
CHRNA1P02708 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHRNA1P02708 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHRNA1P02708 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.34■■□□□ 1.33
CHRNA1P02708 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.34■■□□□ 1.33
CHRNA1P02708 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.34■■□□□ 1.33
CHRNA1P02708 CYP2T1P-201ENST00000432607 1285 ntBASIC23.34■■□□□ 1.33
CHRNA1P02708 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
CHRNA1P02708 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.34■■□□□ 1.33
CHRNA1P02708 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.34■■□□□ 1.33
CHRNA1P02708 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.34■■□□□ 1.33
CHRNA1P02708 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.34■■□□□ 1.33
CHRNA1P02708 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.34■■□□□ 1.33
CHRNA1P02708 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.34■■□□□ 1.33
CHRNA1P02708 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.34■■□□□ 1.33
CHRNA1P02708 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHRNA1P02708 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.34■■□□□ 1.33
CHRNA1P02708 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.33■■□□□ 1.33
CHRNA1P02708 AC007322.4-201ENST00000509611 723 ntBASIC23.33■■□□□ 1.33
CHRNA1P02708 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.33■■□□□ 1.33
CHRNA1P02708 MIR4651-201ENST00000582622 73 ntBASIC23.33■■□□□ 1.33
CHRNA1P02708 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.33■■□□□ 1.33
CHRNA1P02708 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.33■■□□□ 1.33
CHRNA1P02708 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHRNA1P02708 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHRNA1P02708 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHRNA1P02708 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
CHRNA1P02708 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
CHRNA1P02708 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHRNA1P02708 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
CHRNA1P02708 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHRNA1P02708 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHRNA1P02708 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHRNA1P02708 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
CHRNA1P02708 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.32■■□□□ 1.32
CHRNA1P02708 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.32■■□□□ 1.32
CHRNA1P02708 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHRNA1P02708 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHRNA1P02708 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHRNA1P02708 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
CHRNA1P02708 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.32■■□□□ 1.32
CHRNA1P02708 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
CHRNA1P02708 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
CHRNA1P02708 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.31■■□□□ 1.32
CHRNA1P02708 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.31■■□□□ 1.32
CHRNA1P02708 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHRNA1P02708 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms