Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
APOC1P02654 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.78■□□□□ 0.6
APOC1P02654 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
APOC1P02654 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOC1P02654 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
APOC1P02654 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
APOC1P02654 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
APOC1P02654 AL136116.3-201ENST00000402907 1138 ntBASIC18.77■□□□□ 0.6
APOC1P02654 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.77■□□□□ 0.6
APOC1P02654 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.77■□□□□ 0.6
APOC1P02654 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.77■□□□□ 0.6
APOC1P02654 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.77■□□□□ 0.6
APOC1P02654 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.77■□□□□ 0.6
APOC1P02654 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APOC1P02654 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
APOC1P02654 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.77■□□□□ 0.59
APOC1P02654 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 AC010542.4-201ENST00000563151 1910 ntBASIC18.76■□□□□ 0.59
APOC1P02654 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
APOC1P02654 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.76■□□□□ 0.59
APOC1P02654 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
APOC1P02654 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
APOC1P02654 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 AC104564.3-201ENST00000582367 638 ntBASIC18.76■□□□□ 0.59
APOC1P02654 AC010525.1-201ENST00000585559 441 ntBASIC18.76■□□□□ 0.59
APOC1P02654 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
APOC1P02654 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
APOC1P02654 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APOC1P02654 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
APOC1P02654 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
APOC1P02654 AC244015.2-201ENST00000616358 1861 ntBASIC18.75■□□□□ 0.59
APOC1P02654 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
APOC1P02654 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
APOC1P02654 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
APOC1P02654 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.75■□□□□ 0.59
APOC1P02654 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.75■□□□□ 0.59
APOC1P02654 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
APOC1P02654 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.74■□□□□ 0.59
APOC1P02654 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APOC1P02654 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.74■□□□□ 0.59
APOC1P02654 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.74■□□□□ 0.59
APOC1P02654 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOC1P02654 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
APOC1P02654 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms