Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.91■■□□□ 1.74
COL1A1P02452 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.91■■□□□ 1.74
COL1A1P02452 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.91■■□□□ 1.74
COL1A1P02452 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL1A1P02452 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
COL1A1P02452 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.9■■□□□ 1.74
COL1A1P02452 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC25.9■■□□□ 1.74
COL1A1P02452 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
COL1A1P02452 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.9■■□□□ 1.74
COL1A1P02452 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL1A1P02452 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
COL1A1P02452 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
COL1A1P02452 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL1A1P02452 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL1A1P02452 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL1A1P02452 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.89■■□□□ 1.73
COL1A1P02452 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.89■■□□□ 1.73
COL1A1P02452 AC005181.1-201ENST00000604782 1256 ntBASIC25.89■■□□□ 1.73
COL1A1P02452 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL1A1P02452 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
COL1A1P02452 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.88■■□□□ 1.73
COL1A1P02452 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL1A1P02452 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL1A1P02452 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.88■■□□□ 1.73
COL1A1P02452 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
COL1A1P02452 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.88■■□□□ 1.73
COL1A1P02452 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
COL1A1P02452 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.87■■□□□ 1.73
COL1A1P02452 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 AC007322.1-201ENST00000426983 750 ntBASIC25.87■■□□□ 1.73
COL1A1P02452 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.87■■□□□ 1.73
COL1A1P02452 AC127496.7-201ENST00000625110 1798 ntBASIC25.87■■□□□ 1.73
COL1A1P02452 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
COL1A1P02452 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.87■■□□□ 1.73
COL1A1P02452 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL1A1P02452 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL1A1P02452 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL1A1P02452 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.86■■□□□ 1.73
COL1A1P02452 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
COL1A1P02452 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.86■■□□□ 1.73
COL1A1P02452 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.86■■□□□ 1.73
COL1A1P02452 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
COL1A1P02452 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.85■■□□□ 1.73
COL1A1P02452 AC083906.2-201ENST00000511578 360 ntBASIC25.85■■□□□ 1.73
COL1A1P02452 AC053503.5-201ENST00000601508 636 ntBASIC25.85■■□□□ 1.73
COL1A1P02452 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.85■■□□□ 1.73
COL1A1P02452 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
COL1A1P02452 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
COL1A1P02452 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL1A1P02452 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.85■■□□□ 1.73
COL1A1P02452 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.85■■□□□ 1.73
COL1A1P02452 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.85■■□□□ 1.73
COL1A1P02452 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 SLC29A4P1-201ENST00000398760 971 ntBASIC25.84■■□□□ 1.73
COL1A1P02452 TSPY20P-201ENST00000450910 630 ntBASIC25.84■■□□□ 1.73
COL1A1P02452 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.84■■□□□ 1.73
COL1A1P02452 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.84■■□□□ 1.73
COL1A1P02452 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.84■■□□□ 1.73
COL1A1P02452 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.84■■□□□ 1.73
COL1A1P02452 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL1A1P02452 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.84■■□□□ 1.73
COL1A1P02452 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.83■■□□□ 1.73
COL1A1P02452 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms