Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN1O95832 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN1O95832 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN1O95832 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN1O95832 MKRN4P-201ENST00000444706 1521 ntBASIC19.03■□□□□ 0.64
CLDN1O95832 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN1O95832 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLDN1O95832 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN1O95832 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN1O95832 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLDN1O95832 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN1O95832 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN1O95832 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN1O95832 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN1O95832 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN1O95832 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN1O95832 ABCB10P4-201ENST00000566803 2184 ntBASIC19.02■□□□□ 0.63
CLDN1O95832 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN1O95832 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.02■□□□□ 0.63
CLDN1O95832 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CLDN1O95832 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN1O95832 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN1O95832 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN1O95832 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN1O95832 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN1O95832 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN1O95832 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN1O95832 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN1O95832 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 OXCT2P1-201ENST00000447263 1535 ntBASIC19■□□□□ 0.63
CLDN1O95832 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLDN1O95832 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19■□□□□ 0.63
CLDN1O95832 AC006058.3-201ENST00000606217 1069 ntBASIC19■□□□□ 0.63
CLDN1O95832 AC092118.2-201ENST00000613495 667 ntBASIC19■□□□□ 0.63
CLDN1O95832 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19■□□□□ 0.63
CLDN1O95832 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19■□□□□ 0.63
CLDN1O95832 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLDN1O95832 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN1O95832 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19■□□□□ 0.63
CLDN1O95832 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CLDN1O95832 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN1O95832 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN1O95832 UNC93B4-201ENST00000505679 747 ntBASIC18.99■□□□□ 0.63
CLDN1O95832 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN1O95832 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN1O95832 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 AC083880.1-201ENST00000608266 535 ntBASIC18.99■□□□□ 0.63
CLDN1O95832 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CLDN1O95832 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN1O95832 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN1O95832 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CLDN1O95832 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN1O95832 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN1O95832 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN1O95832 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN1O95832 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 CYP2T1P-201ENST00000432607 1285 ntBASIC18.98■□□□□ 0.63
CLDN1O95832 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.98■□□□□ 0.63
CLDN1O95832 AC128676.1-201ENST00000454392 318 ntBASIC18.98■□□□□ 0.63
CLDN1O95832 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN1O95832 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN1O95832 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN1O95832 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN1O95832 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN1O95832 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN1O95832 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN1O95832 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN1O95832 MIR1224-201ENST00000408193 85 ntBASIC18.97■□□□□ 0.63
CLDN1O95832 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN1O95832 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.97■□□□□ 0.63
CLDN1O95832 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN1O95832 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms