Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX4O95219 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.94■□□□□ 0.78
SNX4O95219 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX4O95219 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX4O95219 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX4O95219 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX4O95219 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SNX4O95219 OXCT2P1-201ENST00000447263 1535 ntBASIC19.93■□□□□ 0.78
SNX4O95219 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNX4O95219 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX4O95219 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX4O95219 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.93■□□□□ 0.78
SNX4O95219 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 AC073130.3-201ENST00000624389 2278 ntBASIC19.93■□□□□ 0.78
SNX4O95219 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX4O95219 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX4O95219 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX4O95219 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 LINC01960-201ENST00000563759 1884 ntBASIC19.92■□□□□ 0.78
SNX4O95219 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX4O95219 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
SNX4O95219 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX4O95219 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX4O95219 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX4O95219 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX4O95219 AC012414.1-201ENST00000556676 535 ntBASIC19.92■□□□□ 0.78
SNX4O95219 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX4O95219 AC105233.4-201ENST00000642045 216 ntBASIC19.92■□□□□ 0.78
SNX4O95219 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX4O95219 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SNX4O95219 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX4O95219 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX4O95219 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
SNX4O95219 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX4O95219 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SNX4O95219 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX4O95219 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNX4O95219 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
SNX4O95219 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.91■□□□□ 0.78
SNX4O95219 RARRES2P6-201ENST00000567333 442 ntBASIC19.91■□□□□ 0.78
SNX4O95219 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNX4O95219 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SNX4O95219 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNX4O95219 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX4O95219 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX4O95219 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX4O95219 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.9■□□□□ 0.78
SNX4O95219 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX4O95219 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNX4O95219 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX4O95219 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNX4O95219 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX4O95219 AC097381.1-201ENST00000429019 1296 ntBASIC19.89■□□□□ 0.77
SNX4O95219 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX4O95219 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX4O95219 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms