Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.09■□□□□ 0.65
UBL3O95164 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL3O95164 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.08■□□□□ 0.65
UBL3O95164 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
UBL3O95164 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
UBL3O95164 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL3O95164 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
UBL3O95164 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBL3O95164 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.08■□□□□ 0.64
UBL3O95164 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.08■□□□□ 0.64
UBL3O95164 AC010141.3-201ENST00000456659 717 ntBASIC19.08■□□□□ 0.64
UBL3O95164 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBL3O95164 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.08■□□□□ 0.64
UBL3O95164 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
UBL3O95164 AL136967.2-201ENST00000623968 743 ntBASIC19.08■□□□□ 0.64
UBL3O95164 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
UBL3O95164 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
UBL3O95164 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL3O95164 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBL3O95164 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
UBL3O95164 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.08■□□□□ 0.64
UBL3O95164 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBL3O95164 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
UBL3O95164 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.07■□□□□ 0.64
UBL3O95164 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBL3O95164 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBL3O95164 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBL3O95164 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.06■□□□□ 0.64
UBL3O95164 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBL3O95164 CA15P2-201ENST00000611168 834 ntBASIC19.06■□□□□ 0.64
UBL3O95164 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBL3O95164 AC005229.4-201ENST00000610085 2198 ntBASIC19.06■□□□□ 0.64
UBL3O95164 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBL3O95164 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.06■□□□□ 0.64
UBL3O95164 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
UBL3O95164 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
UBL3O95164 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.05■□□□□ 0.64
UBL3O95164 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 IGHV3-19-201ENST00000521488 291 ntBASIC19.05■□□□□ 0.64
UBL3O95164 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
UBL3O95164 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.05■□□□□ 0.64
UBL3O95164 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBL3O95164 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
UBL3O95164 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.04■□□□□ 0.64
UBL3O95164 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.04■□□□□ 0.64
UBL3O95164 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UBL3O95164 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.04■□□□□ 0.64
UBL3O95164 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.04■□□□□ 0.64
UBL3O95164 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.04■□□□□ 0.64
UBL3O95164 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.04■□□□□ 0.64
UBL3O95164 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBL3O95164 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
UBL3O95164 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
UBL3O95164 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.03■□□□□ 0.64
UBL3O95164 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.03■□□□□ 0.64
UBL3O95164 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.03■□□□□ 0.64
UBL3O95164 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBL3O95164 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.03■□□□□ 0.64
UBL3O95164 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
UBL3O95164 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.02■□□□□ 0.64
UBL3O95164 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBL3O95164 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms