Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC33.58■■■□□ 2.97
PCF11O94913 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC33.58■■■□□ 2.97
PCF11O94913 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC33.58■■■□□ 2.97
PCF11O94913 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
PCF11O94913 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC33.58■■■□□ 2.97
PCF11O94913 FGF8-207ENST00000618991 856 ntTSL 3 BASIC33.58■■■□□ 2.97
PCF11O94913 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC33.58■■■□□ 2.97
PCF11O94913 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC33.58■■■□□ 2.97
PCF11O94913 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC33.58■■■□□ 2.97
PCF11O94913 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
PCF11O94913 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.97
PCF11O94913 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
PCF11O94913 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
PCF11O94913 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
PCF11O94913 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
PCF11O94913 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC33.57■■■□□ 2.96
PCF11O94913 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC33.57■■■□□ 2.96
PCF11O94913 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC33.57■■■□□ 2.96
PCF11O94913 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC33.57■■■□□ 2.96
PCF11O94913 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
PCF11O94913 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC33.57■■■□□ 2.96
PCF11O94913 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC33.56■■■□□ 2.96
PCF11O94913 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC33.56■■■□□ 2.96
PCF11O94913 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
PCF11O94913 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC33.56■■■□□ 2.96
PCF11O94913 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC33.56■■■□□ 2.96
PCF11O94913 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC33.56■■■□□ 2.96
PCF11O94913 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC33.56■■■□□ 2.96
PCF11O94913 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCF11O94913 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC33.55■■■□□ 2.96
PCF11O94913 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
PCF11O94913 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
PCF11O94913 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
PCF11O94913 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
PCF11O94913 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC33.55■■■□□ 2.96
PCF11O94913 PLLP-204ENST00000569059 665 ntTSL 3 BASIC33.55■■■□□ 2.96
PCF11O94913 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.55■■■□□ 2.96
PCF11O94913 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
PCF11O94913 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
PCF11O94913 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
PCF11O94913 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
PCF11O94913 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC33.54■■■□□ 2.96
PCF11O94913 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
PCF11O94913 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
PCF11O94913 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
PCF11O94913 AC008687.6-201ENST00000596318 630 ntBASIC33.53■■■□□ 2.96
PCF11O94913 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC33.53■■■□□ 2.96
PCF11O94913 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC33.53■■■□□ 2.96
PCF11O94913 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC33.52■■■□□ 2.96
PCF11O94913 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
PCF11O94913 MARS-234ENST00000630571 216 ntTSL 5 BASIC33.52■■■□□ 2.96
PCF11O94913 MARS-235ENST00000630803 183 ntTSL 3 BASIC33.52■■■□□ 2.96
PCF11O94913 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
PCF11O94913 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC33.52■■■□□ 2.96
PCF11O94913 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC33.52■■■□□ 2.96
PCF11O94913 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
PCF11O94913 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC33.51■■■□□ 2.96
PCF11O94913 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
PCF11O94913 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC33.51■■■□□ 2.96
PCF11O94913 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC33.51■■■□□ 2.96
PCF11O94913 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
PCF11O94913 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.95
PCF11O94913 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC33.51■■■□□ 2.95
PCF11O94913 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
PCF11O94913 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC33.51■■■□□ 2.95
PCF11O94913 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.51■■■□□ 2.95
PCF11O94913 AC068338.2-201ENST00000563278 1430 ntBASIC33.5■■■□□ 2.95
PCF11O94913 AC083906.2-201ENST00000511578 360 ntBASIC33.5■■■□□ 2.95
PCF11O94913 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC33.5■■■□□ 2.95
PCF11O94913 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
PCF11O94913 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
PCF11O94913 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
PCF11O94913 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
PCF11O94913 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
PCF11O94913 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
PCF11O94913 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
PCF11O94913 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC33.49■■■□□ 2.95
PCF11O94913 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 RNF146-206ENST00000480444 843 ntTSL 2 BASIC33.48■■■□□ 2.95
PCF11O94913 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC33.48■■■□□ 2.95
PCF11O94913 SLC7A5P1-201ENST00000568957 537 ntBASIC33.48■■■□□ 2.95
PCF11O94913 AC133552.2-202ENST00000575694 574 ntBASIC33.48■■■□□ 2.95
PCF11O94913 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.48■■■□□ 2.95
PCF11O94913 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC33.48■■■□□ 2.95
PCF11O94913 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC33.48■■■□□ 2.95
PCF11O94913 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
PCF11O94913 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC33.48■■■□□ 2.95
PCF11O94913 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC33.47■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms