Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC142381.2-201ENST00000566120 298 ntBASIC21.31■■□□□ 1
GPC4O75487 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.3■■□□□ 1
GPC4O75487 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GPC4O75487 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
GPC4O75487 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.3■■□□□ 1
GPC4O75487 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GPC4O75487 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.3■■□□□ 1
GPC4O75487 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.3■■□□□ 1
GPC4O75487 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GPC4O75487 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GPC4O75487 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GPC4O75487 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.3■■□□□ 1
GPC4O75487 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.29■■□□□ 1
GPC4O75487 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.29■■□□□ 1
GPC4O75487 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
GPC4O75487 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
GPC4O75487 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.29■■□□□ 1
GPC4O75487 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.29■■□□□ 1
GPC4O75487 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
GPC4O75487 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GPC4O75487 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
GPC4O75487 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GPC4O75487 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.28■■□□□ 1
GPC4O75487 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.28■■□□□ 1
GPC4O75487 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.28■■□□□ 1
GPC4O75487 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.28■■□□□ 1
GPC4O75487 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.28■■□□□ 1
GPC4O75487 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.28■■□□□ 1
GPC4O75487 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
GPC4O75487 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.28■■□□□ 1
GPC4O75487 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GPC4O75487 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.27■■□□□ 1
GPC4O75487 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GPC4O75487 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.27■■□□□ 1
GPC4O75487 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
GPC4O75487 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.27■■□□□ 1
GPC4O75487 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
GPC4O75487 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.27■■□□□ 1
GPC4O75487 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
GPC4O75487 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.27■□□□□ 0.99
GPC4O75487 TSPY26P-201ENST00000476365 1326 ntBASIC21.27■□□□□ 0.99
GPC4O75487 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
GPC4O75487 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.26■□□□□ 0.99
GPC4O75487 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.26■□□□□ 0.99
GPC4O75487 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GPC4O75487 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.26■□□□□ 0.99
GPC4O75487 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC4O75487 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC4O75487 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC4O75487 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC4O75487 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC4O75487 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC4O75487 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC4O75487 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GPC4O75487 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC4O75487 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.25■□□□□ 0.99
GPC4O75487 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.25■□□□□ 0.99
GPC4O75487 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.24■□□□□ 0.99
GPC4O75487 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.24■□□□□ 0.99
GPC4O75487 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.24■□□□□ 0.99
GPC4O75487 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.24■□□□□ 0.99
GPC4O75487 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.24■□□□□ 0.99
GPC4O75487 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
GPC4O75487 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GPC4O75487 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GPC4O75487 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms