Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ZNF254O75437 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF254O75437 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF254O75437 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF254O75437 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF254O75437 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF254O75437 AL138724.1-201ENST00000606771 1088 ntBASIC18.85■□□□□ 0.61
ZNF254O75437 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.85■□□□□ 0.61
ZNF254O75437 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF254O75437 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF254O75437 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
ZNF254O75437 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF254O75437 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ZNF254O75437 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF254O75437 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ZNF254O75437 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 DUX4L19-201ENST00000557448 1267 ntBASIC18.84■□□□□ 0.61
ZNF254O75437 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF254O75437 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF254O75437 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF254O75437 OXCT2P1-201ENST00000447263 1535 ntBASIC18.84■□□□□ 0.61
ZNF254O75437 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF254O75437 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF254O75437 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
ZNF254O75437 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.83■□□□□ 0.61
ZNF254O75437 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF254O75437 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF254O75437 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
ZNF254O75437 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF254O75437 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF254O75437 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.83■□□□□ 0.61
ZNF254O75437 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF254O75437 AL034346.1-201ENST00000568244 1277 ntBASIC18.83■□□□□ 0.6
ZNF254O75437 AL512631.2-201ENST00000604634 923 ntBASIC18.83■□□□□ 0.6
ZNF254O75437 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
ZNF254O75437 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF254O75437 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF254O75437 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF254O75437 FEM1AP4-201ENST00000443167 1987 ntBASIC18.82■□□□□ 0.6
ZNF254O75437 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF254O75437 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF254O75437 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF254O75437 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZNF254O75437 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF254O75437 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF254O75437 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF254O75437 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZNF254O75437 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF254O75437 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF254O75437 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF254O75437 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF254O75437 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ZNF254O75437 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF254O75437 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF254O75437 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF254O75437 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF254O75437 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ZNF254O75437 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.8■□□□□ 0.6
ZNF254O75437 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF254O75437 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.79■□□□□ 0.6
ZNF254O75437 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.79■□□□□ 0.6
ZNF254O75437 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF254O75437 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
ZNF254O75437 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms