Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC010542.4-201ENST00000563151 1910 ntBASIC21.73■■□□□ 1.07
PRAMEF11O60813 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF11O60813 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF11O60813 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.73■■□□□ 1.07
PRAMEF11O60813 AC034268.1-201ENST00000441047 882 ntBASIC21.73■■□□□ 1.07
PRAMEF11O60813 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.73■■□□□ 1.07
PRAMEF11O60813 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF11O60813 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
PRAMEF11O60813 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF11O60813 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF11O60813 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF11O60813 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF11O60813 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.72■■□□□ 1.07
PRAMEF11O60813 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF11O60813 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PRAMEF11O60813 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF11O60813 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF11O60813 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF11O60813 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRAMEF11O60813 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF11O60813 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEF11O60813 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF11O60813 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.7■■□□□ 1.06
PRAMEF11O60813 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF11O60813 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.7■■□□□ 1.06
PRAMEF11O60813 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 MIR5787-201ENST00000611784 55 ntBASIC21.7■■□□□ 1.06
PRAMEF11O60813 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF11O60813 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRAMEF11O60813 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 KRT87P-202ENST00000534226 1464 ntBASIC21.69■■□□□ 1.06
PRAMEF11O60813 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF11O60813 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF11O60813 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF11O60813 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.68■■□□□ 1.06
PRAMEF11O60813 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF11O60813 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF11O60813 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF11O60813 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF11O60813 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.67■■□□□ 1.06
PRAMEF11O60813 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms