Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
URB1O60287 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
URB1O60287 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
URB1O60287 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
URB1O60287 MIR718-201ENST00000390190 70 ntBASIC20.18■□□□□ 0.82
URB1O60287 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.18■□□□□ 0.82
URB1O60287 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.18■□□□□ 0.82
URB1O60287 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
URB1O60287 AC073648.6-201ENST00000641589 218 ntBASIC20.18■□□□□ 0.82
URB1O60287 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
URB1O60287 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
URB1O60287 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
URB1O60287 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
URB1O60287 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.17■□□□□ 0.82
URB1O60287 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
URB1O60287 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
URB1O60287 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
URB1O60287 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.17■□□□□ 0.82
URB1O60287 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.17■□□□□ 0.82
URB1O60287 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.17■□□□□ 0.82
URB1O60287 AC010331.1-201ENST00000611423 582 ntBASIC20.17■□□□□ 0.82
URB1O60287 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
URB1O60287 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.17■□□□□ 0.82
URB1O60287 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
URB1O60287 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
URB1O60287 AC079630.1-202ENST00000618127 1840 ntBASIC20.16■□□□□ 0.82
URB1O60287 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.16■□□□□ 0.82
URB1O60287 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
URB1O60287 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.16■□□□□ 0.82
URB1O60287 REXO1L12P-201ENST00000622156 912 ntBASIC20.16■□□□□ 0.82
URB1O60287 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.16■□□□□ 0.82
URB1O60287 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
URB1O60287 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.15■□□□□ 0.82
URB1O60287 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.15■□□□□ 0.82
URB1O60287 LINC01023-201ENST00000606054 436 ntBASIC20.15■□□□□ 0.82
URB1O60287 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.15■□□□□ 0.82
URB1O60287 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.15■□□□□ 0.82
URB1O60287 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.15■□□□□ 0.82
URB1O60287 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
URB1O60287 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.15■□□□□ 0.82
URB1O60287 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.15■□□□□ 0.82
URB1O60287 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.15■□□□□ 0.82
URB1O60287 AC069236.1-201ENST00000604339 616 ntBASIC20.15■□□□□ 0.82
URB1O60287 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
URB1O60287 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
URB1O60287 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
URB1O60287 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
URB1O60287 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
URB1O60287 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.14■□□□□ 0.82
URB1O60287 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.14■□□□□ 0.81
URB1O60287 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.14■□□□□ 0.81
URB1O60287 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.14■□□□□ 0.81
URB1O60287 AC004812.2-201ENST00000611079 2094 ntBASIC20.14■□□□□ 0.81
URB1O60287 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
URB1O60287 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
URB1O60287 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.14■□□□□ 0.81
URB1O60287 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.14■□□□□ 0.81
URB1O60287 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.13■□□□□ 0.81
URB1O60287 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.13■□□□□ 0.81
URB1O60287 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.13■□□□□ 0.81
URB1O60287 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.13■□□□□ 0.81
URB1O60287 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.13■□□□□ 0.81
URB1O60287 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.13■□□□□ 0.81
URB1O60287 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 AC093787.1-201ENST00000450396 207 ntBASIC20.13■□□□□ 0.81
URB1O60287 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.13■□□□□ 0.81
URB1O60287 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
URB1O60287 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
URB1O60287 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.12■□□□□ 0.81
URB1O60287 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
URB1O60287 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
URB1O60287 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
URB1O60287 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.12■□□□□ 0.81
URB1O60287 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.12■□□□□ 0.81
URB1O60287 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
URB1O60287 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms