Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC003102.1-202ENST00000563394 1796 ntBASIC20.56■□□□□ 0.88
PRICKLE3O43900 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.56■□□□□ 0.88
PRICKLE3O43900 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE3O43900 C11orf96-202ENST00000528572 1834 ntBASIC20.55■□□□□ 0.88
PRICKLE3O43900 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE3O43900 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE3O43900 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRICKLE3O43900 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE3O43900 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE3O43900 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PRICKLE3O43900 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.54■□□□□ 0.88
PRICKLE3O43900 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.54■□□□□ 0.88
PRICKLE3O43900 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.54■□□□□ 0.88
PRICKLE3O43900 NTF6G-201ENST00000591094 616 ntBASIC20.54■□□□□ 0.88
PRICKLE3O43900 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRICKLE3O43900 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE3O43900 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRICKLE3O43900 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE3O43900 AC004854.2-201ENST00000608450 1441 ntBASIC20.53■□□□□ 0.88
PRICKLE3O43900 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.52■□□□□ 0.88
PRICKLE3O43900 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 KRT87P-202ENST00000534226 1464 ntBASIC20.52■□□□□ 0.88
PRICKLE3O43900 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.52■□□□□ 0.88
PRICKLE3O43900 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.52■□□□□ 0.88
PRICKLE3O43900 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.52■□□□□ 0.88
PRICKLE3O43900 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRICKLE3O43900 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRICKLE3O43900 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 AC010542.4-201ENST00000563151 1910 ntBASIC20.51■□□□□ 0.87
PRICKLE3O43900 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 EEF1DP3-203ENST00000566025 782 ntBASIC20.51■□□□□ 0.87
PRICKLE3O43900 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.51■□□□□ 0.87
PRICKLE3O43900 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRICKLE3O43900 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PRICKLE3O43900 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.5■□□□□ 0.87
PRICKLE3O43900 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PRICKLE3O43900 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRICKLE3O43900 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRICKLE3O43900 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.49■□□□□ 0.87
PRICKLE3O43900 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms