Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SRGAP3O43295 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.58■■□□□ 1.85
SRGAP3O43295 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.58■■□□□ 1.85
SRGAP3O43295 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 NTF6G-201ENST00000591094 616 ntBASIC26.58■■□□□ 1.85
SRGAP3O43295 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.58■■□□□ 1.85
SRGAP3O43295 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.58■■□□□ 1.85
SRGAP3O43295 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.58■■□□□ 1.85
SRGAP3O43295 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.58■■□□□ 1.85
SRGAP3O43295 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SRGAP3O43295 C11orf96-202ENST00000528572 1834 ntBASIC26.58■■□□□ 1.84
SRGAP3O43295 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SRGAP3O43295 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
SRGAP3O43295 AC003102.1-202ENST00000563394 1796 ntBASIC26.57■■□□□ 1.84
SRGAP3O43295 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SRGAP3O43295 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.57■■□□□ 1.84
SRGAP3O43295 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SRGAP3O43295 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.57■■□□□ 1.84
SRGAP3O43295 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.57■■□□□ 1.84
SRGAP3O43295 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SRGAP3O43295 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.57■■□□□ 1.84
SRGAP3O43295 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.56■■□□□ 1.84
SRGAP3O43295 AC004854.2-201ENST00000608450 1441 ntBASIC26.56■■□□□ 1.84
SRGAP3O43295 AP004607.4-201ENST00000530158 1459 ntBASIC26.56■■□□□ 1.84
SRGAP3O43295 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRGAP3O43295 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.56■■□□□ 1.84
SRGAP3O43295 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.56■■□□□ 1.84
SRGAP3O43295 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SRGAP3O43295 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SRGAP3O43295 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.56■■□□□ 1.84
SRGAP3O43295 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.56■■□□□ 1.84
SRGAP3O43295 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SRGAP3O43295 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
SRGAP3O43295 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SRGAP3O43295 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SRGAP3O43295 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SRGAP3O43295 KRT87P-202ENST00000534226 1464 ntBASIC26.55■■□□□ 1.84
SRGAP3O43295 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 AC010542.4-201ENST00000563151 1910 ntBASIC26.55■■□□□ 1.84
SRGAP3O43295 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.55■■□□□ 1.84
SRGAP3O43295 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.55■■□□□ 1.84
SRGAP3O43295 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.55■■□□□ 1.84
SRGAP3O43295 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SRGAP3O43295 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SRGAP3O43295 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.54■■□□□ 1.84
SRGAP3O43295 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.54■■□□□ 1.84
SRGAP3O43295 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.54■■□□□ 1.84
SRGAP3O43295 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SRGAP3O43295 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
SRGAP3O43295 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
SRGAP3O43295 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRGAP3O43295 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SRGAP3O43295 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SRGAP3O43295 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
SRGAP3O43295 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
SRGAP3O43295 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.53■■□□□ 1.84
SRGAP3O43295 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SRGAP3O43295 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SRGAP3O43295 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.53■■□□□ 1.84
SRGAP3O43295 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.53■■□□□ 1.84
SRGAP3O43295 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.52■■□□□ 1.84
SRGAP3O43295 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.52■■□□□ 1.84
SRGAP3O43295 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.52■■□□□ 1.84
SRGAP3O43295 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.52■■□□□ 1.84
SRGAP3O43295 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
SRGAP3O43295 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SRGAP3O43295 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
SRGAP3O43295 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.51■■□□□ 1.84
SRGAP3O43295 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.51■■□□□ 1.84
SRGAP3O43295 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRGAP3O43295 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SRGAP3O43295 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SRGAP3O43295 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.51■■□□□ 1.83
SRGAP3O43295 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms