Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PHGDHO43175 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.2■□□□□ 0.98
PHGDHO43175 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.2■□□□□ 0.98
PHGDHO43175 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.2■□□□□ 0.98
PHGDHO43175 AC104564.3-201ENST00000582367 638 ntBASIC21.2■□□□□ 0.98
PHGDHO43175 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.2■□□□□ 0.98
PHGDHO43175 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PHGDHO43175 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.2■□□□□ 0.98
PHGDHO43175 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PHGDHO43175 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.19■□□□□ 0.98
PHGDHO43175 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.19■□□□□ 0.98
PHGDHO43175 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.19■□□□□ 0.98
PHGDHO43175 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.19■□□□□ 0.98
PHGDHO43175 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PHGDHO43175 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PHGDHO43175 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.18■□□□□ 0.98
PHGDHO43175 AL136116.3-201ENST00000402907 1138 ntBASIC21.18■□□□□ 0.98
PHGDHO43175 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.18■□□□□ 0.98
PHGDHO43175 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 AP004607.7-201ENST00000527152 1677 ntBASIC21.18■□□□□ 0.98
PHGDHO43175 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHGDHO43175 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.17■□□□□ 0.98
PHGDHO43175 AP005435.1-201ENST00000529293 1178 ntBASIC21.17■□□□□ 0.98
PHGDHO43175 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.17■□□□□ 0.98
PHGDHO43175 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.17■□□□□ 0.98
PHGDHO43175 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.17■□□□□ 0.98
PHGDHO43175 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHGDHO43175 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.17■□□□□ 0.98
PHGDHO43175 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHGDHO43175 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.16■□□□□ 0.98
PHGDHO43175 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.16■□□□□ 0.98
PHGDHO43175 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHGDHO43175 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.16■□□□□ 0.98
PHGDHO43175 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
PHGDHO43175 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHGDHO43175 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.15■□□□□ 0.98
PHGDHO43175 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PHGDHO43175 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PHGDHO43175 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.15■□□□□ 0.98
PHGDHO43175 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHGDHO43175 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.15■□□□□ 0.98
PHGDHO43175 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PHGDHO43175 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHGDHO43175 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHGDHO43175 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHGDHO43175 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PHGDHO43175 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.14■□□□□ 0.97
PHGDHO43175 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.14■□□□□ 0.97
PHGDHO43175 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.14■□□□□ 0.97
PHGDHO43175 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.14■□□□□ 0.97
PHGDHO43175 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHGDHO43175 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.13■□□□□ 0.97
PHGDHO43175 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.13■□□□□ 0.97
PHGDHO43175 AC003102.1-202ENST00000563394 1796 ntBASIC21.13■□□□□ 0.97
PHGDHO43175 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms