Protein–RNA interactions for Protein: O15321

TM9SF1, Transmembrane 9 superfamily member 1, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1O15321 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.19■□□□□ 0.98
TM9SF1O15321 MTDHP2-201ENST00000601468 714 ntBASIC21.19■□□□□ 0.98
TM9SF1O15321 AC012354.3-201ENST00000623734 483 ntBASIC21.19■□□□□ 0.98
TM9SF1O15321 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
TM9SF1O15321 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
TM9SF1O15321 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.19■□□□□ 0.98
TM9SF1O15321 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
TM9SF1O15321 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF1O15321 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TM9SF1O15321 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TM9SF1O15321 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TM9SF1O15321 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TM9SF1O15321 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TM9SF1O15321 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.18■□□□□ 0.98
TM9SF1O15321 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TM9SF1O15321 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 AC068587.7-201ENST00000641602 218 ntBASIC21.18■□□□□ 0.98
TM9SF1O15321 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.18■□□□□ 0.98
TM9SF1O15321 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.18■□□□□ 0.98
TM9SF1O15321 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TM9SF1O15321 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF1O15321 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.18■□□□□ 0.98
TM9SF1O15321 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TM9SF1O15321 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.17■□□□□ 0.98
TM9SF1O15321 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.17■□□□□ 0.98
TM9SF1O15321 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.17■□□□□ 0.98
TM9SF1O15321 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.17■□□□□ 0.98
TM9SF1O15321 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
TM9SF1O15321 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.17■□□□□ 0.98
TM9SF1O15321 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
TM9SF1O15321 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF1O15321 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.17■□□□□ 0.98
TM9SF1O15321 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TM9SF1O15321 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.16■□□□□ 0.98
TM9SF1O15321 AC133637.1-201ENST00000624115 1537 ntBASIC21.16■□□□□ 0.98
TM9SF1O15321 AC241377.3-202ENST00000626088 1088 ntBASIC21.16■□□□□ 0.98
TM9SF1O15321 AC241585.3-202ENST00000628937 1088 ntBASIC21.16■□□□□ 0.98
TM9SF1O15321 AC245100.8-202ENST00000629247 1058 ntBASIC21.16■□□□□ 0.98
TM9SF1O15321 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.16■□□□□ 0.98
TM9SF1O15321 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.16■□□□□ 0.98
TM9SF1O15321 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.16■□□□□ 0.98
TM9SF1O15321 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TM9SF1O15321 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM9SF1O15321 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TM9SF1O15321 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.15■□□□□ 0.98
TM9SF1O15321 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.15■□□□□ 0.98
TM9SF1O15321 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.15■□□□□ 0.98
TM9SF1O15321 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.15■□□□□ 0.98
TM9SF1O15321 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM9SF1O15321 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM9SF1O15321 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM9SF1O15321 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.14■□□□□ 0.98
TM9SF1O15321 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TM9SF1O15321 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF1O15321 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF1O15321 AL033527.3-201ENST00000566366 1196 ntBASIC21.14■□□□□ 0.97
TM9SF1O15321 AL451085.2-201ENST00000605085 799 ntBASIC21.14■□□□□ 0.97
TM9SF1O15321 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF1O15321 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF1O15321 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM9SF1O15321 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms