Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SEMA3EO15041 AC006970.2-201ENST00000450065 779 ntBASIC25.85■■□□□ 1.73
SEMA3EO15041 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SEMA3EO15041 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.85■■□□□ 1.73
SEMA3EO15041 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.85■■□□□ 1.73
SEMA3EO15041 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.85■■□□□ 1.73
SEMA3EO15041 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.85■■□□□ 1.73
SEMA3EO15041 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SEMA3EO15041 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.85■■□□□ 1.73
SEMA3EO15041 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.85■■□□□ 1.73
SEMA3EO15041 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SEMA3EO15041 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SEMA3EO15041 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.85■■□□□ 1.73
SEMA3EO15041 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SEMA3EO15041 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.84■■□□□ 1.73
SEMA3EO15041 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.84■■□□□ 1.73
SEMA3EO15041 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SEMA3EO15041 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.84■■□□□ 1.73
SEMA3EO15041 AC092053.2-201ENST00000640557 1818 ntBASIC25.84■■□□□ 1.73
SEMA3EO15041 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SEMA3EO15041 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.83■■□□□ 1.73
SEMA3EO15041 C1orf229-201ENST00000623686 2258 ntBASIC25.83■■□□□ 1.73
SEMA3EO15041 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SEMA3EO15041 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.83■■□□□ 1.73
SEMA3EO15041 NCF1B-203ENST00000435988 1254 ntBASIC25.83■■□□□ 1.73
SEMA3EO15041 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.83■■□□□ 1.73
SEMA3EO15041 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SEMA3EO15041 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
SEMA3EO15041 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.83■■□□□ 1.73
SEMA3EO15041 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SEMA3EO15041 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SEMA3EO15041 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SEMA3EO15041 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SEMA3EO15041 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SEMA3EO15041 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SEMA3EO15041 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.82■■□□□ 1.72
SEMA3EO15041 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.82■■□□□ 1.72
SEMA3EO15041 MIR663A-201ENST00000385250 93 ntBASIC25.82■■□□□ 1.72
SEMA3EO15041 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.82■■□□□ 1.72
SEMA3EO15041 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
SEMA3EO15041 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.82■■□□□ 1.72
SEMA3EO15041 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.82■■□□□ 1.72
SEMA3EO15041 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SEMA3EO15041 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.82■■□□□ 1.72
SEMA3EO15041 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.82■■□□□ 1.72
SEMA3EO15041 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SEMA3EO15041 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SEMA3EO15041 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.81■■□□□ 1.72
SEMA3EO15041 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.81■■□□□ 1.72
SEMA3EO15041 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.81■■□□□ 1.72
SEMA3EO15041 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 AC007322.1-201ENST00000426983 750 ntBASIC25.81■■□□□ 1.72
SEMA3EO15041 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.81■■□□□ 1.72
SEMA3EO15041 AC010536.3-201ENST00000620306 533 ntBASIC25.81■■□□□ 1.72
SEMA3EO15041 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
SEMA3EO15041 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SEMA3EO15041 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.81■■□□□ 1.72
SEMA3EO15041 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SEMA3EO15041 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.8■■□□□ 1.72
SEMA3EO15041 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.8■■□□□ 1.72
SEMA3EO15041 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.8■■□□□ 1.72
SEMA3EO15041 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.8■■□□□ 1.72
SEMA3EO15041 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC25.8■■□□□ 1.72
SEMA3EO15041 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.8■■□□□ 1.72
SEMA3EO15041 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
SEMA3EO15041 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.8■■□□□ 1.72
SEMA3EO15041 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SEMA3EO15041 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SEMA3EO15041 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SEMA3EO15041 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
SEMA3EO15041 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.79■■□□□ 1.72
SEMA3EO15041 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.79■■□□□ 1.72
SEMA3EO15041 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SEMA3EO15041 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms