Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF11O14788 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF11O14788 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF11O14788 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFSF11O14788 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF11O14788 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFSF11O14788 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.18■□□□□ 0.66
TNFSF11O14788 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.18■□□□□ 0.66
TNFSF11O14788 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF11O14788 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF11O14788 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF11O14788 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNFSF11O14788 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF11O14788 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF11O14788 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
TNFSF11O14788 KRT18P5-201ENST00000436075 1291 ntBASIC19.17■□□□□ 0.66
TNFSF11O14788 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFSF11O14788 NTF6G-201ENST00000591094 616 ntBASIC19.17■□□□□ 0.66
TNFSF11O14788 EP400NL-214ENST00000641289 2402 ntBASIC19.17■□□□□ 0.66
TNFSF11O14788 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNFSF11O14788 AC026471.6-201ENST00000622954 1905 ntBASIC19.17■□□□□ 0.66
TNFSF11O14788 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TNFSF11O14788 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF11O14788 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF11O14788 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TNFSF11O14788 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.16■□□□□ 0.66
TNFSF11O14788 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.16■□□□□ 0.66
TNFSF11O14788 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF11O14788 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.16■□□□□ 0.66
TNFSF11O14788 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TNFSF11O14788 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF11O14788 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF11O14788 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF11O14788 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TNFSF11O14788 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFSF11O14788 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFSF11O14788 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.15■□□□□ 0.66
TNFSF11O14788 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.15■□□□□ 0.66
TNFSF11O14788 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TNFSF11O14788 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 KRT87P-202ENST00000534226 1464 ntBASIC19.15■□□□□ 0.66
TNFSF11O14788 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.15■□□□□ 0.66
TNFSF11O14788 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TNFSF11O14788 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFSF11O14788 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TNFSF11O14788 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TNFSF11O14788 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TNFSF11O14788 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TNFSF11O14788 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TNFSF11O14788 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.14■□□□□ 0.65
TNFSF11O14788 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 AC004854.2-201ENST00000608450 1441 ntBASIC19.14■□□□□ 0.65
TNFSF11O14788 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TNFSF11O14788 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF11O14788 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TNFSF11O14788 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.14■□□□□ 0.65
TNFSF11O14788 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TNFSF11O14788 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.13■□□□□ 0.65
TNFSF11O14788 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.13■□□□□ 0.65
TNFSF11O14788 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.13■□□□□ 0.65
TNFSF11O14788 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.13■□□□□ 0.65
TNFSF11O14788 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms